A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 22-Jun-2022 number of released structures: 12128
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NDB ID: PD0952  PDB ID: 2O8C 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
17E_6OG8:DT23_F5.2750.201-0.153-35.1634.508-61.103
12E_DA3:DT28_F0.8670.319-0.0315.248-19.057-1.96
112E_DA13:DT18_F0.3610.5780.4418.51-15.7918.189
13E_DC4:DG27_F1.29-0.0380.6642.175-25.4084.239
14E_DC5:DG26_F-0.0950.318-0.38513.366-25.3121.588
16E_DC7:DG24_F-0.008-0.2730.09410.39-2.819-2.061
18E_DC9:DG22_F0.887-0.2920.24-17.797-5.243-0.31
110E_DC11:DG20_F-0.510.198-0.24112.409-14.5238.339
11E_DG1:DC30_F0.4640.722-1.539-40.034-22.85414.04
15E_DG6:DC25_F-0.443-0.4340.4948.3-2.468-7.386
19E_DG10:DC21_F0.1110.0330.4479.563-11.133.426
113E_DG14:DC17_F-0.4030.7260.53232.505-15.98311.544
114E_DG15:DC16_F-1.642-0.297-0.902-5.552-43.8922.22
111E_DT12:DA19_F-0.2120.5750.164.11-20.3486.318

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.