A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 28-Sep-2022 number of released structures: 12311
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NDB ID: PD0952  PDB ID: 2O8C 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
16EE_6OG8DC9:DG22DT23_FF3.630.8453.225-9.037-0.64510.7143.814-19.8210.095-2.87240.21614.023
12EE_DA3DC4:DG27DT28_FF0.89-0.6043.264-4.1790.34533.371-1.1-2.2073.1270.5977.24333.626
111EE_DA13DG14:DC17DT18_FF0.0060.3193.0190.08818.51519.692-3.8990.0092.43143.627-0.20626.967
13EE_DC4DC5:DG26DG27_FF-0.609-0.0842.90610.3341.71826.493-0.5073.2632.4873.575-21.5128.455
14EE_DC5DG6:DC25DG26_FF-0.1790.0943.313-9.41410.56335.966-1.2-0.9263.16516.34914.5738.563
17EE_DC9DG10:DC21DG22_FF0.201-0.1232.6711.43413.32929.839-2.099-0.1552.40624.395-2.62432.65
19EE_DC11DT12:DA19DG20_FF-0.205-0.2413.659-0.4966.84434.964-1.5020.2563.55211.2580.81535.61
11EE_DG1DA3:DT28DC30_FF-1.0721.6455.394-17.3326.18370.4841.041-0.0725.6065.26814.76972.544
15EE_DG6DC7:DG24DC25_FF-0.011-0.2593.2872.1491.72834.406-0.7050.3523.2642.916-3.62634.513
18EE_DG10DC11:DG20DC21_FF0.4-0.4423.125.9678.07823.395-3.2060.722.82818.846-13.92125.432
112EE_DG14DG15:DC16DC17_FF-0.557-0.6714.3062.21414.12225.94-5.1031.6853.43228.84-4.52129.558
110EE_DT12DA13:DT18DA19_FF0.9611.6013.0041.662-4.32545.5842.395-1.1042.88-5.565-2.13945.806

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.