Download
Software
Tools
Education
Standards
About NDB
A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 18-May-2022 number of released structures: 12082
Search DNA
Search RNA
Advanced Search
Search for released structures
NDB ID:
DR0036
PDB ID:
2OE8
 
Base Pair Morphology Parameters
CSV Format
Model Number
Pair Number
Pair Name
Shear
Stretch
Stagger
Buckle
Propellor
Opening
1
10
A_A1411:U1489_B
0.196
-0.213
0.287
1.181
-15.192
2.328
1
13
A_A14:U86_B
-0.132
-0.122
0.138
-2.537
-17.038
7.747
1
3
A_C1404:G1497_B
0.343
-0.064
-0.005
1.863
-10.803
0.515
1
6
A_C1407:G1494_B
0.232
-0.185
-0.19
6.251
-14.169
2.249
1
8
A_C1409:A1492_B
-5.392
-0.936
0.546
16.277
-16.896
67.284
1
14
A_C15:G85_B
0.391
-0.201
-0.015
2.972
-14.698
0.696
1
15
A_C16:G84_B
0.582
-0.058
0.086
0.045
-7.811
2.98
1
1
A_G2:C99_B
-0.078
-0.095
-0.112
-4.73
-11.554
-1.901
1
2
A_G3:C98_B
-0.146
-0.337
-0.241
-4.901
-14.467
1.111
1
4
A_G1405:C1496_B
-0.329
-0.087
-0.226
-6.473
-13.928
2.567
1
7
A_G1408:A1493_B
7.862
-4.773
-0.347
-19.035
-21.377
-53.012
1
11
A_G1412:C1488_B
-0.234
-0.205
0.164
-2.697
-17.667
-1.777
1
5
A_U1406:U1495_B
-2.374
-1.727
0.078
6.051
-17.426
1.012
1
9
A_U1410:A1490_B
-0.015
-0.072
0.183
-3.384
-13.802
1.833
1
12
A_U1413:A1487_B
0.057
-0.126
0.22
0.958
-12.41
5.963
The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures',
Nucleic Acids Res
.
31(17)
, 5108-21. Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures',
Nat Protoc
.
3(7)
, 1213-27.