A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 17-Aug-2022 number of released structures: 12237
Search for released structures

NDB ID: PD0994  PDB ID: 2OZS 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
14T_DA7:DT111_P0.054-0.1110.145-3.329-7.1785.801
17T_DA10:DT108_P-0.1140.005-0.189-0.533-16.83-6.553
19T_DA12:DT106_P-0.183-0.386-0.206-6.502-10.039-1.845
11T_DC4:DDG114_P0.419-0.156-0.4815.011-5.736-1.396
18T_DC11:DG107_P0.501-0.1080.252-2.233-10.1643.751
111T_DC14:DG104_P0.325-0.256-0.0553.344-9.393-4.53
112T_DC15:DG103_P-0.517-0.17-0.041-8.134-7.45-9.361
114T_DC17:DG101_P0.598-0.347-0.31415.9565.766-4.98
16T_DG9:DC109_P0.117-0.3080.08211.128-9.3990.462
110T_DG13:DC105_P-0.27-0.207-0.0672.154-10.154-4.398
113T_DG16:DC102_P0.345-0.0730.3415.598-0.605-9.062
12T_DT5:DA113_P-0.214-0.071-0.2043.743-0.249-7.81
13T_DT6:DA112_P-0.039-0.2430.00510.579-15.3935.563
15T_DT8:DA110_P-0.0190.1-0.11711.54-12.61.211

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.