A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 17-Aug-2022 number of released structures: 12237
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NDB ID: PD0994  PDB ID: 2OZS 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
14TT_DA7DT8:DA110DT111_PP-0.945-0.5832.9141.4932.329.681-1.5542.112.8124.477-2.90629.805
17TT_DA10DC11:DG107DT108_PP0.989-0.6593.258-2.3727.39135.788-2.033-1.892.99811.8563.80436.593
19TT_DA12DG13:DC105DT106_PP0.1160.0713.114-3.2055.91830.301-0.952-0.8043.04511.1486.03831.023
11TT_DC4DT5:DA113DDG114_PP-1.398-0.943.498-1.0975.6127.697-3.2912.5953.29911.5632.26128.269
18TT_DC11DA12:DT106DG107_PP-0.8940.0953.3582.2977.64632.671-1.1131.9313.22813.345-4.00933.607
111TT_DC14DC15:DG103DG104_PP0.304-0.6143.5211.38311.80831.752-3.05-0.2893.11120.696-2.42433.851
112TT_DC15DG16:DC102DG103_PP0.6970.5013.199-2.022-1.86142.270.878-1.1643.14-2.5782.842.355
16TT_DG9DA10:DT108DC109_PP-1.231-0.0353.526-3.5377.71836.599-1.1591.4063.54512.0915.5437.537
110TT_DG13DC14:DG104DC105_PP-0.209-0.7863.154-0.883.9635.205-1.8450.223.0546.5211.44835.43
113TT_DG16DC17:DG101DC102_PP1.208-0.3173.0727.4475.73831.163-1.544-0.8893.16210.389-13.48232.517
12TT_DT5DT6:DA112DA113_PP0.659-1.0113.278-2.7980.35634.416-1.757-1.543.2050.64.71934.528
13TT_DT6DA7:DT111DA112_PP0.7-0.6113.7452.347-1.78133.969-0.714-0.7633.81-3.041-4.00934.093
15TT_DT8DG9:DC109DA110_PP-0.0080.1043.331-0.10411.80632.548-1.697-0.0023.17620.2510.17834.568

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.