A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 11-Dec-2019 number of released structures: 10507
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NDB ID: 2P7C  PDB ID: 2P7C 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
11A_DA1:DT24_C-0.465-0.0650.24115.515-10.386-3.194
12A_DA2:DT23_C-0.115-0.0030.34912.691-13.47-4.316
13A_DA3:DT22_C0.365-0.0720.82411.547-10.897-3.367
16A_DA6:DT19_C0.524-0.10.532-9.9412.46.115
19A_DA9:DT16_C0.4790.0440.36113.9916.164-3.928
111A_DA11:DT14_C0.561-0.057-0.481-3.895-5.09-0.989
110A_DC10:DG15_C0.675-0.117-0.2567.1235.124-1.76
14A_DG4:DC21_C0.4060.0450.094-3.827-14.6181.072
15A_DT5:DA20_C0.636-0.120.173-9.659-10.41-1.973
17A_DT7:DA18_C0.538-0.2731.04-15.9514.5662.453
18A_DT8:DA17_C0.619-0.0810.216-1.6447.058-0.724
112A_DT12:DA13_C0.297-0.017-0.273-7.985-3.039-2.038

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.