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As of 18-May-2022 number of released structures: 12082
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NDB ID: PD1022  PDB ID: 2QBY 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
11CC_DA1DG2:DC30DT31_DD0.457-0.8173.539-0.666.25935.621-2.252-0.8353.34310.1331.06936.155
13CC_DA3DT4:DA28DT29_DD0.095-1.2463.236-4.6883.11432.549-2.705-0.9383.0635.5048.28733.019
19CC_DA9DG10:DC22DT23_DD0.568-0.5263.493-5.843-4.27231.459-0.139-2.1263.376-7.7510.60132.26
111CC_DA11DT12:DA20DT21_DD-0.227-1.0653.411-2.138-3.77231.388-1.21-0.0043.519-6.9313.92831.679
114CC_DA14DA15:DT17DT18_DD-0.353-0.453.4055.92.66332.3-1.261.6563.2454.727-10.47432.925
115CC_DA15DA16:DT16DT17_DD0.8480.5413.165-0.653-0.00936.5460.864-1.4393.149-0.0141.04236.552
116CC_DA16DC17:DG15DT16_DD-0.653-0.6663.2784.111.78828.289-1.7432.2333.1063.629-8.34328.635
120CC_DA20DG21:DC11DT12_DD1.2390.3653.3794.0224.59830.91-0.242-1.4843.5248.522-7.45431.494
123CC_DA23DA24:DT8DT9_DD0.055-0.4153.1272.994-6.98838.9580.1790.2573.147-10.357-4.43839.664
124CC_DA24DA25:DT7DT8_DD0.341-0.7143.2370.359-5.43636.479-0.389-0.4913.309-8.625-0.5736.87
125CC_DA25DT26:DA6DT7_DD-0.549-1.2173.3950.124-2.5931.301-1.7361.0383.48-4.791-0.22931.405
129CC_DA29DC30:DG2DT3_DD0.616-1.2213.113-9.6181.34324.329-3.028-3.7322.6133.03721.74526.168
18CC_DC8DA9:DT23DG24_DD-0.0251.1732.9959.04213.19627.296-0.2941.7243.07325.386-17.39531.561
117CC_DC17DG18:DC14DG15_DD0.3932.2373.774-2.96828.04822.006-2.473-1.294.06152.4825.55435.636
130CC_DC30DA31:DT1DG2_DD-0.887-1.7643.173-3.0778.55434.728-3.9921.0352.74214.0365.04835.863
12CC_DG2DA3:DT29DC30_DD0.514-0.6453.6477.833-5.59238.912-0.2090.2763.732-8.241-11.54540.04
110CC_DG10DA11:DT21DC22_DD-0.881-1.1893.726-4.5870.49835.597-2.0130.6723.790.817.46535.885
113CC_DG13DA14:DT18DC19_DD0.336-0.593.0150.181-0.36735.936-0.907-0.5213.023-0.595-0.29435.938
118CC_DG18DT19:DA13DC14_DD-0.7340.7043.606-2.159-10.47936.5292.5240.833.323-16.2933.35738.013
121CC_DG21DG22:DC10DC11_DD-1.4150.3893.139-5.5845.65931.97-0.2851.5383.3510.089.94732.919
122CC_DG22DA23:DT9DC10_DD-0.292-0.5612.935-6.634-3.135.627-0.505-0.3772.977-5.00210.70436.348
14CC_DT4DT5:DA27DA28_DD1.201-0.1332.9248.349-5.2535.8320.449-0.8383.105-8.34-13.26337.122
15CC_DT5DT6:DA26DA27_DD0.115-0.13.3051.178.81329.087-1.9730.0173.14317.052-2.26330.387
16CC_DT6DT7:DA25DA26_DD0.4720.8283.4551.375-0.59441.4691.235-0.5113.456-0.838-1.94241.495
17CC_DT7DC8:DG24DA25_DD-0.3461.073.83-8.1780.66434.9381.625-0.8293.831.08813.39335.86
112CC_DT12DG13:DC19DA20_DD0.091-1.3612.774-4.653-1.79230.592-2.251-0.942.803-3.3698.74530.986
119CC_DT19DA20:DT12DA13_DD-0.0172.0493.322-1.323-18.64351.1583.297-0.0562.49-20.8121.47754.248
126CC_DT26DT27:DA5DA6_DD0.61-1.063.421-1.575-3.8534.43-1.153-1.2793.485-6.4752.64934.673
127CC_DT27DT28:DA4DA5_DD-0.113-0.7853.378-1.038-0.58639.886-1.0810.0423.39-0.8581.52139.903
128CC_DT28DA29:DT3DA4_DD0.42-0.2923.0637.7016.11629.173-1.6830.6332.95511.73-14.76930.752

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.