A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 17-Aug-2022 number of released structures: 12237
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NDB ID: PD1032  PDB ID: 2R2T 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
11B_DA1:DT16_G0.06-0.057-0.118-22.8511.333-4.274
15B_DA5:DT12_G0.2880.0130.2126.228-9.978-0.869
16B_DG6:DC11_G-0.263-0.49-0.0612.039-10.813-0.563
12B_DT2:DA15_G0.322-0.3720.031-11.356-2.0121.482
13B_DT3:DA14_G-0.123-0.369-0.028-5.506-12.9766.199
14B_DT4:DA13_G-0.143-0.173-0.3165.155-9.4469.535
17B_DT7:DA10_G-0.312-0.015-0.0092.886-9.164-4.474
18B_DT8:DA9_G-0.967-0.2570.229-2.289-5.2554.47

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.