2R93: Base Pair Morphology Step Parameters

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NDB ID: PR0305 PDB ID: 2R93

Base Pair Morphology Step Parameters

CSV Format

Model Number	Step Number	Step Name	Shift	Slide	Rise	Tilt	Roll	Twist	X-Displacement	Y-Displacement	Helical Rise	Inclination	Tip	Helical Twist
1	2	RR_A3U4:A16U17_RR	0.39	-0.945	3.387	2.607	6.425	32.299	-2.767	-0.239	3.166	11.386	-4.62	33.016
1	5	RR_C6U7:G13G14_RR	0.613	-1.315	3.126	9.646	-1.394	33.808	-1.972	0.413	3.224	-2.337	-16.174	35.145
1	1	RR_G2A3:U17C18_RR	0.872	-0.808	2.871	4.239	15.717	27.783	-3.822	-0.939	2.217	29.721	-8.016	32.12
1	3	RR_U4U5:A15A16_RR	-0.327	-0.911	3.482	4.355	8.389	27.975	-3.611	1.588	3.004	16.759	-8.701	29.498
1	4	RR_U5C6:G14A15_RR	0.036	-2.037	4.138	-8.927	2.849	27.024	-4.926	-2.577	3.708	5.876	18.415	28.574

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.