2RO2: Base Pair Morphology Step Parameters

A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 18-May-2022 number of released structures: 12082

Search for released structures

NDB ID: 2RO2 PDB ID: 2RO2

Base Pair Morphology Step Parameters

CSV Format

Model Number	Step Number	Step Name	Shift	Slide	Rise	Tilt	Roll	Twist	X-Displacement	Y-Displacement	Helical Rise	Inclination	Tip	Helical Twist
1	4	AA_A4G5:U19U20_AA	0.13	-1.887	2.858	-4.324	7.349	23.074	-6.206	-1.348	2.107	17.618	10.366	24.579
1	6	AA_A6C7:G17U18_AA	-0.055	-1.795	3.298	-0.651	3.465	32.144	-3.824	-0.014	3.093	6.234	1.171	32.331
1	7	AA_C7C8:G16G17_AA	0.113	-1.853	3.401	1.044	8.322	31.927	-4.637	-0.027	2.843	14.811	-1.858	32.982
1	8	AA_C8U9:G15G16_AA	1.048	-1.424	3.509	4.257	6.238	42.224	-2.605	-0.986	3.361	8.577	-5.853	42.864
1	1	AA_G1G2:C22C23_AA	-0.061	-1.877	3.313	-0.561	6.649	31.104	-4.588	0.014	2.861	12.224	1.031	31.795
1	2	AA_G2G3:C21C22_AA	-0.074	-1.808	3.332	-0.137	7.378	31.097	-4.566	0.111	2.839	13.525	0.251	31.939
1	3	AA_G3A4:U20C21_AA	-0.077	-1.527	3.228	-0.609	5.118	31.827	-3.618	0.036	2.954	9.256	1.101	32.23
1	5	AA_G5A6:U18U19_AA	-0.472	-1.729	3.269	-0.74	4.184	38.196	-3.133	0.627	3.078	6.37	1.126	38.423
1	9	AA_U9G10:G13G15_AA	-2.604	-0.318	2.625	-3.674	7.134	48.171	-0.833	2.921	2.735	8.67	4.465	48.795

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.