A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 14-Aug-2019 number of released structures: 10334
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NDB ID: 2STT  PDB ID: 2STT 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
14B_DA4:DT31_C-0.623-0.112-0.2334.216-8.062-2.643
19B_DA10:DT25_C-0.3140.0580.012-3.947-10.824-0.391
110B_DA11:DT24_C0.209-0.057-0.199-9.153-20.1790.913
116B_DA17:DT18_C-0.6040.075-0.0665.194-0.158-8.671
12B_DC2:DG33_C-0.546-0.008-0.1883.9170.1230.038
16B_DC6:DG29_C-0.510.0140.156-3.4940.4012.643
114B_DC15:DG20_C-0.5230.093-0.013-0.696-0.6651.674
13B_DG3:DC32_C0.4990.0570.091-2.196-3.5010.093
15B_DG5:DC30_C0.5790.0390.06310.3-9.1490.962
17B_DG8:DC27_C0.7630.02-0.654.65515.691-5.314
18B_DG9:DC26_C0.488-0.006-0.2431.025-3.4942.809
111B_DG12:DC23_C0.0230.1560.7753.7126.99-0.537
115B_DG16:DC19_C0.43-0.09-0.074-2.394-0.704-4.451
11B_DT1:DA34_C0.4330.032-0.012-2.310.429-11.209
112B_DT13:DA22_C0.504-0.096-1.021-2.421-12.8271.369
113B_DT14:DA21_C0.34-0.078-0.056-1.952-19.332.053

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.