A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 14-Aug-2019 number of released structures: 10334
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NDB ID: 2STW  PDB ID: 2STW 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
14B_DA4:DT31_C-0.673-0.032-0.3333.772-8.031-2.305
19B_DA10:DT25_C-0.28-0.0650.07-3.416-9.8093.932
110B_DA11:DT24_C-0.179-0.272-0.123-5.481-21.1476.369
116B_DA17:DT18_C-0.699-0.056-0.0253.7050.422-2.652
12B_DC2:DG33_C-0.398-0.043-0.0041.477-1.23-0.836
16B_DC6:DG29_C-0.605-0.0710.30114.534-1.9164.287
114B_DC15:DG20_C-0.4820.030.007-3.318-1.3823.888
13B_DG3:DC32_C0.4840.030.1370.224-1.8822.913
15B_DG5:DC30_C0.518-0.049-0.21514.969-8.13-0.878
17B_DG8:DC27_C0.0730.004-0.525-3.55612.551.89
18B_DG9:DC26_C0.509-0.001-0.453-9.5773.681.083
111B_DG12:DC23_C-0.176-0.0590.465-0.2021.5180.164
115B_DG16:DC19_C0.535-0.006-0.078-6.68-1.455-1.655
11B_DT1:DA34_C0.582-0.105-0.044-1.5990.579-4.335
112B_DT13:DA22_C0.371-0.237-0.818-4.765-12.9492.307
113B_DT14:DA21_C0.231-0.0130.038-4.173-18.382.65

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.