A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 18-May-2022 number of released structures: 12082
Search for released structures

NDB ID: NA0011  PDB ID: 2VUQ 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
13A_A3:U70_B-0.019-0.0990.0140.635-13.4721.476
12A_C2:G71_B0.121-0.119-0.0435.618-10.626-0.617
11A_G1:C72_B-0.46-0.190.079-0.375-5.453-0.196
16A_G6:C67_B-0.232-0.178-0.127-2.903-9.016-2.229
17A_G7:C66_B-0.328-0.175-0.106-1.402-4.9371.278
14A_U4:A69_B0.011-0.087-0.064-1.301-22.5171.154
15A_U5:A68_B-0.118-0.0890.112-3.97-10.155-0.798

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.