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As of 22-Jun-2022 number of released structures: 12128
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NDB ID: NA0248  PDB ID: 2W7N 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
114F_BRU17:DA2_E-0.118-0.3130.184-2.023-18.7573.355
15F_DA12:DT7_E0.102-0.0860.030.537-8.988-1.695
17F_DA13:DT6_E-0.068-0.315-0.5318.17-5.984-0.459
19F_DA14:DT5_E-0.424-0.3540.0712.924-14.8022.651
112F_DA16:DT3_E0.2910.003-0.203-4.568-10.9095.558
111F_DC15:DG4_E0.289-0.205-0.5014.083-20.624.315
13F_DT11:DA8_E-0.081-0.070.14-8.43-4.864-3.491
116F_DT18:DA1_E0.087-0.153-0.2973.352-7.425-2.603
14G_DA12:DT7_H-0.495-0.24-0.6841.42-7.1126.51
16G_DA13:DT6_H0.2350.0420.3615.828-14.4875.647
18G_DA14:DT5_H0.7450.2150.70523.066-11.4292.091
113G_DA16:BRU3_H0.164-0.519-0.122-3.048-16.563.923
115G_DA17:BRU2_H0.22-0.153-0.066-2.469-8.7522.452
11G_DC10:DG9_H0.153-0.2260.5-10.815-14.0684.548
110G_DC15:DG4_H0.672-0.2670.3212.772-17.7461.165
117G_DG18:DC1_H-0.53-0.2630.385-0.69-14.1098.886
12G_DT11:DA8_H-0.352-0.190.1027.007-13.549-0.396

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.