A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 22-Jun-2022 number of released structures: 12128
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NDB ID: NA0250  PDB ID: 2W7P 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
14E_DA6:DT13_F-0.8250.615-0.306-10.27-17.9039.448
15E_DA7:DT12_F0.0780.0091.368-2.758-2.67514.053
18E_DA10:DT9_F-0.0690.140.145-22.6814.732-4.853
111E_DC13:DG6_F-0.6430.24-0.5911.289-12.9988.444
11E_DG3:DC16_F1.7341.601-0.502-14.901-0.88730.266
12E_DG4:DC15_F-2.222-0.130.8078.848-8.90112.032
13E_DG5:DC14_F0.554-0.3470.2217.081-18.664-7.558
16E_DG8:DC11_F0.0260.5980.48319.52-0.95513.729
17E_DG9:DC10_F-0.5870.098-0.664-15.591-12.7967.343
19E_DT11:DA8_F-0.3140.0850.231-14.245.722-1.624
110E_DT12:DA7_F-0.561-0.036-1.52423.249-16.629-5.639
117P_DA6:DT13_T-0.8730.24-1.981-28.133-25.2255.061
118P_DA7:DT12_T-0.60.287-0.748-3.742-15.00817.322
121P_DA10:DT9_T0.435-0.01-0.145-1.818-7.0623.771
124P_DC13:DG6_T0.3330.357-0.02216.404-0.638-0.21
112P_DG1:DC18_T0.7850.060.189-4.3065.9443.705
113P_DG2:DC17_T0.8970.890.0743.926-22.0268.499
114P_DG3:DC16_T0.2450.0720.005-9.504-16.895-1.544
115P_DG4:DC15_T0.0490.1390.404-1.319-6.282-7.598
116P_DG5:DC14_T0.54-0.178-1.033-12.898-20.4266.068
119P_DG8:DC11_T-0.1970.2940.19618.17-1.2279.713
120P_DG9:DC10_T-0.765-0.513-0.447-5.245-21.2685.029
122P_DT11:DA8_T-0.252-0.14-0.3447.393-1.4938.781
123P_DT12:DA7_T-0.8990.0460.18113.3820.948-2.641

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.