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As of 22-Jun-2022 number of released structures: 12128
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NDB ID:
NA0250
PDB ID:
2W7P
 
Base Pair Morphology Step Parameters
CSV Format
Model Number
Step Number
Step Name
Shift
Slide
Rise
Tilt
Roll
Twist
X-Displacement
Y-Displacement
Helical Rise
Inclination
Tip
Helical Twist
1
4
EE_DA6DA7:DT12DT13_FF
-0.246
-0.032
2.951
-19.999
4.991
38.928
-0.483
-1.435
2.737
6.93
27.771
43.86
1
5
EE_DA7DG8:DC11DT12_FF
0.626
-0.467
3.311
5.801
-11.521
33.627
0.976
-0.142
3.347
-19.065
-9.599
35.949
1
8
EE_DA10DT11:DA8DT9_FF
-0.11
-1.016
3.216
1.049
4.74
28.547
-3.036
0.443
3.006
9.526
-2.109
28.948
1
1
EE_DG3DG4:DC15DC16_FF
0.194
-0.233
2.736
-7.793
-2.603
16.618
0.451
-4.121
2.408
-8.374
25.068
18.525
1
2
EE_DG4DG5:DC14DC15_FF
-1.03
2.641
3.823
1.013
10.084
51.575
2.166
1.246
4.215
11.464
-1.151
52.494
1
3
EE_DG5DA6:DT13DC14_FF
-0.116
0.365
3.66
1.679
-0.083
32.726
0.663
0.529
3.649
-0.147
-2.978
32.768
1
6
EE_DG8DG9:DC10DC11_FF
-0.272
-1.138
4.232
5.656
5.089
32.184
-3.087
1.686
3.908
9.023
-10.028
33.048
1
7
EE_DG9DA10:DT9DC10_FF
-0.844
-0.196
3.298
-9.992
2.712
37.339
-0.643
-0.002
3.383
4.14
15.25
38.698
1
9
EE_DT11DT12:DA7DA8_FF
-0.399
0.339
2.36
12.733
-1.86
27.683
0.903
2.523
1.965
-3.648
-24.973
30.475
1
10
EE_DT12DC13:DG6DA7_FF
0.65
0.151
3.792
-4.34
20.172
27.208
-3.513
-1.921
3.054
36.893
7.937
34.029
1
16
PP_DA6DA7:DT12DT13_TT
0.226
0.292
2.357
-11.864
15.523
29.02
-1.246
-1.702
2.023
27.407
20.948
34.866
1
17
PP_DA7DG8:DC11DT12_TT
0.573
0.34
2.897
-6.944
-5.188
33.912
1.241
-1.856
2.653
-8.719
11.669
34.97
1
20
PP_DA10DT11:DA8DT9_TT
0.144
-0.859
3.128
1.925
6.649
21.736
-4.365
0.271
2.748
17.083
-4.945
22.799
1
11
PP_DG1DG2:DC17DC18_TT
-0.035
-0.025
3.398
8.722
2.558
34.008
-0.437
1.409
3.28
4.279
-14.591
35.167
1
12
PP_DG2DG3:DC16DC17_TT
-0.596
0.532
3.713
-1.062
5.239
31.622
-0.123
0.859
3.767
9.529
1.932
32.059
1
13
PP_DG3DG4:DC15DC16_TT
0.197
-0.436
2.96
-4.63
2.316
34.107
-1.058
-0.977
2.874
3.92
7.838
34.486
1
14
PP_DG4DG5:DC14DC15_TT
0.612
0.105
3.826
11.097
6.214
37.634
-0.717
0.656
3.82
9.312
-16.632
39.651
1
15
PP_DG5DA6:DT13DC14_TT
-0.422
0.248
3.533
1.952
10.062
26.245
-2.065
1.366
3.358
21.161
-4.104
28.142
1
18
PP_DG8DG9:DC10DC11_TT
-0.143
-0.964
3.745
3.474
8.592
35.366
-2.856
0.761
3.398
13.851
-5.601
36.522
1
19
PP_DG9DA10:DT9DC10_TT
-0.261
0.201
3.322
-0.602
-1.775
42.014
0.466
0.3
3.314
-2.474
0.839
42.054
1
21
PP_DT11DT12:DA7DA8_TT
-0.128
-0.464
3.224
-4.363
4.43
26.955
-2.022
-0.768
3.091
9.346
9.205
27.65
1
22
PP_DT12DC13:DG6DA7_TT
0.111
-0.124
3.407
4.196
11.254
35.811
-1.708
0.394
3.217
17.7
-6.598
37.709
The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures',
Nucleic Acids Res
.
31(17)
, 5108-21. Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures',
Nat Protoc
.
3(7)
, 1213-27.