A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 18-Sep-2019 number of released structures: 10387
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NDB ID: NA2633  PDB ID: 2YPF 


Base Pair Hydrogen Bonding Classification

CSV Format

Model NumberPair NumberPair NameLeontis / Westhof ClassificationSaenger Classification
13B_DA1:DT-1_C120
15B_DA3:DT-3_C120
17B_DA5:DT-5_C120
18B_DA6:DT-6_C120
19B_DA7:DT-7_C120
113B_DA11:DT-11_C120
114B_DA12:DT-12_C120
121B_DA19:DT-19_C10
110B_DC8:DG-8_C119
111B_DC9:DG-9_C119
115B_DC13:DG-13_C119
116B_DC14:DG-14_C119
117B_DC15:DG-15_C119
119B_DC17:DG-17_C119
11B_DT-1:DA1_C120
12B_DT0:DA0_C120
14B_DT2:DA-2_C120
16B_DT4:DA-4_C120
112B_DT10:DA-10_C120
118B_DT16:DA-16_C120
120B_DT18:DA-18_C120

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)