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As of 18-May-2022 number of released structures: 12082
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NDB ID: DR0019  PDB ID: 2BE0 


RNA Base-Pairs, Stacking and other pairwise interactions

CSV Format

Nucleotide 1Nucleotide 2Base-PairsBase-StackingBase-Phosphate
2BE0|1|A|A|152BE0|1|A|A|16s35
2BE0|1|A|A|162BE0|1|A|A|15s53
2BE0|1|A|A|162BE0|1|A|A|160BPh
2BE0|1|A|A|162BE0|1|A|G|17
2BE0|1|A|A|62BE0|1|A|A|60BPh
2BE0|1|A|A|62BE0|1|A|C|5s53
2BE0|1|A|A|62BE0|1|A|C|7s35
2BE0|1|A|A|62BE0|1|B|G|38s55
2BE0|1|A|A|82BE0|1|A|A|80BPh
2BE0|1|A|A|82BE0|1|A|C|7s53
2BE0|1|A|A|82BE0|1|A|C|9s35
2BE0|1|A|A|82BE0|1|B|G|35s55
2BE0|1|A|A|82BE0|1|B|U|34cWW
2BE0|1|A|C|102BE0|1|A|C|100BPh
2BE0|1|A|C|102BE0|1|A|C|9s53
2BE0|1|A|C|102BE0|1|A|G|11s35
2BE0|1|A|C|102BE0|1|B|G|32cWW
2BE0|1|A|C|102BE0|1|B|G|33s55
2BE0|1|A|C|192BE0|1|A|C|190BPh
2BE0|1|A|C|192BE0|1|A|G|20s35
2BE0|1|A|C|192BE0|1|A|U|18s53
2BE0|1|A|C|192BE0|1|B|G|24cWW
2BE0|1|A|C|22BE0|1|A|C|20BPh
2BE0|1|A|C|22BE0|1|A|G|1s53
2BE0|1|A|C|22BE0|1|A|G|3s35
2BE0|1|A|C|22BE0|1|B|G|41cWW
2BE0|1|A|C|212BE0|1|A|C|210BPh
2BE0|1|A|C|212BE0|1|A|G|20s53
2BE0|1|A|C|212BE0|1|B|G|22cWW
2BE0|1|A|C|52BE0|1|A|A|6s35
2BE0|1|A|C|52BE0|1|A|C|50BPh
2BE0|1|A|C|52BE0|1|A|U|4s53
2BE0|1|A|C|52BE0|1|B|G|38cWW
2BE0|1|A|C|52BE0|1|B|U|39s55
2BE0|1|A|C|72BE0|1|A|A|6s53
2BE0|1|A|C|72BE0|1|A|A|8s35
2BE0|1|A|C|72BE0|1|A|C|70BPh
2BE0|1|A|C|72BE0|1|B|G|35cWW
2BE0|1|A|C|92BE0|1|A|A|8s53
2BE0|1|A|C|92BE0|1|A|C|10s35
2BE0|1|A|C|92BE0|1|A|C|90BPh
2BE0|1|A|C|92BE0|1|B|G|33cWW
2BE0|1|A|G|12BE0|1|A|C|2s35
2BE0|1|A|G|12BE0|1|A|G|10BPh
2BE0|1|A|G|12BE0|1|B|C|42cWW
2BE0|1|A|G|112BE0|1|A|C|10s53
2BE0|1|A|G|112BE0|1|A|G|110BPh
2BE0|1|A|G|112BE0|1|A|G|12s35
2BE0|1|A|G|112BE0|1|B|C|31cWW
2BE0|1|A|G|112BE0|1|B|G|32s55
2BE0|1|A|G|122BE0|1|A|G|11s53
2BE0|1|A|G|122BE0|1|A|G|120BPh
2BE0|1|A|G|122BE0|1|A|U|13s35
2BE0|1|A|G|122BE0|1|B|C|30cWW
2BE0|1|A|G|122BE0|1|B|C|31s55
2BE0|1|A|G|142BE0|1|A|G|140BPh
2BE0|1|A|G|142BE0|1|A|U|13s53
2BE0|1|A|G|142BE0|1|B|A|29s55
2BE0|1|A|G|142BE0|1|B|C|28cWW
2BE0|1|A|G|172BE0|1|A|A|16
2BE0|1|A|G|172BE0|1|A|G|17n0BP
2BE0|1|A|G|172BE0|1|A|U|18s35
2BE0|1|A|G|172BE0|1|B|A|27s55
2BE0|1|A|G|172BE0|1|B|C|26cWW
2BE0|1|A|G|202BE0|1|A|C|19s53
2BE0|1|A|G|202BE0|1|A|C|21s35
2BE0|1|A|G|202BE0|1|A|G|200BPh
2BE0|1|A|G|202BE0|1|B|C|23cWW
2BE0|1|A|G|202BE0|1|B|G|24s55
2BE0|1|A|G|32BE0|1|A|C|2s53
2BE0|1|A|G|32BE0|1|A|G|30BPh
2BE0|1|A|G|32BE0|1|A|U|4s35
2BE0|1|A|G|32BE0|1|B|C|40cWW
2BE0|1|A|G|32BE0|1|B|G|41s55
2BE0|1|A|U|132BE0|1|A|G|12s53
2BE0|1|A|U|132BE0|1|A|G|14s35
2BE0|1|A|U|132BE0|1|A|U|130BPh
2BE0|1|A|U|132BE0|1|B|A|29cWW
2BE0|1|A|U|182BE0|1|A|C|19s35
2BE0|1|A|U|182BE0|1|A|G|17s53
2BE0|1|A|U|182BE0|1|A|U|180BPh
2BE0|1|A|U|182BE0|1|B|C|26s55
2BE0|1|A|U|182BE0|1|B|U|25cWW
2BE0|1|A|U|42BE0|1|A|C|5s35
2BE0|1|A|U|42BE0|1|A|G|3s53
2BE0|1|A|U|42BE0|1|A|U|40BPh
2BE0|1|A|U|42BE0|1|B|U|39cWW
2BE0|1|B|A|272BE0|1|A|G|17s55
2BE0|1|B|A|272BE0|1|B|A|270BPh
2BE0|1|B|A|272BE0|1|B|C|26s53
2BE0|1|B|A|272BE0|1|B|C|28s35
2BE0|1|B|A|292BE0|1|A|G|14s55
2BE0|1|B|A|292BE0|1|A|U|13cWW
2BE0|1|B|A|292BE0|1|B|A|290BPh
2BE0|1|B|A|292BE0|1|B|C|28s53
2BE0|1|B|A|292BE0|1|B|C|30s35
2BE0|1|B|A|362BE0|1|B|A|37s35
2BE0|1|B|A|372BE0|1|B|A|36s53
2BE0|1|B|A|372BE0|1|B|A|370BPh
2BE0|1|B|C|232BE0|1|A|G|20cWW
2BE0|1|B|C|232BE0|1|B|C|230BPh
2BE0|1|B|C|232BE0|1|B|G|22s53
2BE0|1|B|C|232BE0|1|B|G|24ns35
2BE0|1|B|C|262BE0|1|A|G|17cWW
2BE0|1|B|C|262BE0|1|A|U|18s55
2BE0|1|B|C|262BE0|1|B|A|27s35
2BE0|1|B|C|262BE0|1|B|C|260BPh
2BE0|1|B|C|262BE0|1|B|U|25s53
2BE0|1|B|C|282BE0|1|A|G|14cWW
2BE0|1|B|C|282BE0|1|B|A|27s53
2BE0|1|B|C|282BE0|1|B|A|29s35
2BE0|1|B|C|282BE0|1|B|C|280BPh
2BE0|1|B|C|302BE0|1|A|G|12cWW
2BE0|1|B|C|302BE0|1|B|A|29s53
2BE0|1|B|C|302BE0|1|B|C|300BPh
2BE0|1|B|C|302BE0|1|B|C|31s35
2BE0|1|B|C|312BE0|1|A|G|11cWW
2BE0|1|B|C|312BE0|1|A|G|12s55
2BE0|1|B|C|312BE0|1|B|C|30s53
2BE0|1|B|C|312BE0|1|B|C|310BPh
2BE0|1|B|C|312BE0|1|B|G|32s35
2BE0|1|B|C|402BE0|1|A|G|3cWW
2BE0|1|B|C|402BE0|1|B|C|400BPh
2BE0|1|B|C|402BE0|1|B|G|41s35
2BE0|1|B|C|402BE0|1|B|U|39s53
2BE0|1|B|C|422BE0|1|A|G|1cWW
2BE0|1|B|C|422BE0|1|B|C|420BPh
2BE0|1|B|C|422BE0|1|B|G|41s53
2BE0|1|B|G|222BE0|1|A|C|21cWW
2BE0|1|B|G|222BE0|1|B|C|23s35
2BE0|1|B|G|222BE0|1|B|G|220BPh
2BE0|1|B|G|242BE0|1|A|C|19cWW
2BE0|1|B|G|242BE0|1|A|G|20s55
2BE0|1|B|G|242BE0|1|B|C|23ns53
2BE0|1|B|G|242BE0|1|B|G|240BPh
2BE0|1|B|G|242BE0|1|B|U|25s35
2BE0|1|B|G|322BE0|1|A|C|10cWW
2BE0|1|B|G|322BE0|1|A|G|11s55
2BE0|1|B|G|322BE0|1|B|C|31s53
2BE0|1|B|G|322BE0|1|B|G|320BPh
2BE0|1|B|G|322BE0|1|B|G|33s35
2BE0|1|B|G|332BE0|1|A|C|10s55
2BE0|1|B|G|332BE0|1|A|C|9cWW
2BE0|1|B|G|332BE0|1|B|G|32s53
2BE0|1|B|G|332BE0|1|B|G|330BPh
2BE0|1|B|G|332BE0|1|B|U|34s35
2BE0|1|B|G|352BE0|1|A|A|8s55
2BE0|1|B|G|352BE0|1|A|C|7cWW
2BE0|1|B|G|352BE0|1|B|G|350BPh
2BE0|1|B|G|352BE0|1|B|U|34s53
2BE0|1|B|G|382BE0|1|A|A|6s55
2BE0|1|B|G|382BE0|1|A|C|5cWW
2BE0|1|B|G|382BE0|1|B|G|38n0BP
2BE0|1|B|G|382BE0|1|B|U|39s35
2BE0|1|B|G|412BE0|1|A|C|2cWW
2BE0|1|B|G|412BE0|1|A|G|3s55
2BE0|1|B|G|412BE0|1|B|C|40s53
2BE0|1|B|G|412BE0|1|B|C|42s35
2BE0|1|B|G|412BE0|1|B|G|410BPh
2BE0|1|B|U|252BE0|1|A|U|18cWW
2BE0|1|B|U|252BE0|1|B|C|26s35
2BE0|1|B|U|252BE0|1|B|G|24s53
2BE0|1|B|U|252BE0|1|B|U|250BPh
2BE0|1|B|U|342BE0|1|A|A|8cWW
2BE0|1|B|U|342BE0|1|B|G|33s53
2BE0|1|B|U|342BE0|1|B|G|35s35
2BE0|1|B|U|342BE0|1|B|U|340BPh
2BE0|1|B|U|392BE0|1|A|C|5s55
2BE0|1|B|U|392BE0|1|A|U|4cWW
2BE0|1|B|U|392BE0|1|B|C|40s35
2BE0|1|B|U|392BE0|1|B|G|38s53
2BE0|1|B|U|392BE0|1|B|U|390BPh


Base-PairsCount (18)Relative Frequency
cWW181.000
Base-PhosphateCount (38)Relative Frequency
0BPh381.000
Base-StackingCount (26)Relative Frequency
s53150.577
s55110.423

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)