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As of 18-May-2022 number of released structures: 12082
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NDB ID: PR0220  PDB ID: 2DU4 


RNA Base-Pairs, Stacking and other pairwise interactions

CSV Format

Nucleotide 1Nucleotide 2Base-PairsBase-StackingBase-Phosphate
2DU4|1|C|A|9042DU4|1|C|A|9040BPh
2DU4|1|C|A|9042DU4|1|C|C|903s53
2DU4|1|C|A|9042DU4|1|C|G|905s35
2DU4|1|C|A|9042DU4|1|C|G|969ns55
2DU4|1|C|A|9042DU4|1|C|U|968cWW
2DU4|1|C|A|904||||4_5552DU4|1|C|A|904||||4_5550BPh
2DU4|1|C|A|904||||4_5552DU4|1|C|C|903||||4_555s53
2DU4|1|C|A|904||||4_5552DU4|1|C|G|905||||4_555s35
2DU4|1|C|A|904||||4_5552DU4|1|C|G|969||||4_555ns55
2DU4|1|C|A|904||||4_5552DU4|1|C|U|968||||4_555cWW
2DU4|1|C|A|9122DU4|1|C|A|912n0BP
2DU4|1|C|A|9122DU4|1|C|C|911s53
2DU4|1|C|A|9122DU4|1|C|G|913s35
2DU4|1|C|A|9122DU4|1|C|G|923s55
2DU4|1|C|A|9122DU4|1|C|U|922cWW
2DU4|1|C|A|912||||4_5552DU4|1|C|A|912||||4_555n0BP
2DU4|1|C|A|912||||4_5552DU4|1|C|C|911||||4_555s53
2DU4|1|C|A|912||||4_5552DU4|1|C|G|913||||4_555s35
2DU4|1|C|A|912||||4_5552DU4|1|C|G|923||||4_555s55
2DU4|1|C|A|912||||4_5552DU4|1|C|U|922||||4_555cWW
2DU4|1|C|A|9142DU4|1|C|G|913ns53
2DU4|1|C|A|9142DU4|1|C|G|915s35
2DU4|1|C|A|9142DU4|1|C|U|908tHW
2DU4|1|C|A|9142DU4|1|C|U|921s55
2DU4|1|C|A|914||||4_5552DU4|1|C|G|913||||4_555ns53
2DU4|1|C|A|914||||4_5552DU4|1|C|G|915||||4_555s35
2DU4|1|C|A|914||||4_5552DU4|1|C|U|908||||4_555tHW
2DU4|1|C|A|914||||4_5552DU4|1|C|U|921||||4_555s55
2DU4|1|C|A|9302DU4|1|C|A|9300BPh
2DU4|1|C|A|9302DU4|1|C|C|931s35
2DU4|1|C|A|9302DU4|1|C|G|929s53
2DU4|1|C|A|9302DU4|1|C|U|938cWW
2DU4|1|C|A|930||||4_5552DU4|1|C|A|930||||4_5550BPh
2DU4|1|C|A|930||||4_5552DU4|1|C|C|931||||4_555s35
2DU4|1|C|A|930||||4_5552DU4|1|C|G|929||||4_555s53
2DU4|1|C|A|930||||4_5552DU4|1|C|U|938||||4_555cWW
2DU4|1|C|A|9352DU4|1|C|A|9350BPh
2DU4|1|C|A|9352DU4|1|C|G|936ns35
2DU4|1|C|A|935||||4_5552DU4|1|C|A|935||||4_5550BPh
2DU4|1|C|A|935||||4_5552DU4|1|C|G|936||||4_555ns35
2DU4|1|C|A|9372DU4|1|C|C|931cWW
2DU4|1|C|A|9372DU4|1|C|U|938s35
2DU4|1|C|A|937||||4_5552DU4|1|C|C|931||||4_555cWW
2DU4|1|C|A|937||||4_5552DU4|1|C|U|938||||4_555s35
2DU4|1|C|A|9462DU4|1|C|A|9460BPh
2DU4|1|C|A|9462DU4|1|C|C|947s35
2DU4|1|C|A|9462DU4|1|C|G|909s55
2DU4|1|C|A|9462DU4|1|C|U|908ncSS
2DU4|1|C|A|9462DU4|1|C|U|9217BPh
2DU4|1|C|A|946||||4_5552DU4|1|C|A|946||||4_5550BPh
2DU4|1|C|A|946||||4_5552DU4|1|C|C|947||||4_555s35
2DU4|1|C|A|946||||4_5552DU4|1|C|G|909||||4_555s55
2DU4|1|C|A|946||||4_5552DU4|1|C|U|908||||4_555ncSS
2DU4|1|C|A|946||||4_5552DU4|1|C|U|921||||4_5557BPh
2DU4|1|C|A|9572DU4|1|C|A|957n0BP
2DU4|1|C|A|9572DU4|1|C|C|960s35
2DU4|1|C|A|9572DU4|1|C|G|917s55
2DU4|1|C|A|9572DU4|1|C|U|953tHW
2DU4|1|C|A|9572DU4|1|C|U|959
2DU4|1|C|A|957||||4_5552DU4|1|C|A|957||||4_555n0BP
2DU4|1|C|A|957||||4_5552DU4|1|C|C|960||||4_555s35
2DU4|1|C|A|957||||4_5552DU4|1|C|G|917||||4_555s55
2DU4|1|C|A|957||||4_5552DU4|1|C|U|953||||4_555tHW
2DU4|1|C|A|957||||4_5552DU4|1|C|U|959||||4_555
2DU4|1|C|A|9582DU4|1|C|A|958n0BP
2DU4|1|C|A|9582DU4|1|C|C|919n7BP
2DU4|1|C|A|9582DU4|1|C|C|947s53
2DU4|1|C|A|9582DU4|1|C|G|916tSS
2DU4|1|C|A|9582DU4|1|C|U|959s35
2DU4|1|C|A|958||||4_5552DU4|1|C|A|958||||4_555n0BP
2DU4|1|C|A|958||||4_5552DU4|1|C|C|919||||4_555n7BP
2DU4|1|C|A|958||||4_5552DU4|1|C|C|947||||4_555s53
2DU4|1|C|A|958||||4_5552DU4|1|C|G|916||||4_555tSS
2DU4|1|C|A|958||||4_5552DU4|1|C|U|959||||4_555s35
2DU4|1|C|C|9022DU4|1|C|C|902n0BP
2DU4|1|C|C|9022DU4|1|C|C|903ncWH
2DU4|1|C|C|9022DU4|1|C|G|901s53
2DU4|1|C|C|9022DU4|1|C|G|970ncWW
2DU4|1|C|C|902||||4_5552DU4|1|C|C|902||||4_555n0BP
2DU4|1|C|C|902||||4_5552DU4|1|C|C|903||||4_555ncWH
2DU4|1|C|C|902||||4_5552DU4|1|C|G|901||||4_555s53
2DU4|1|C|C|902||||4_5552DU4|1|C|G|970||||4_555ncWW
2DU4|1|C|C|9032DU4|1|C|A|904s35
2DU4|1|C|C|9032DU4|1|C|C|902ncHW
2DU4|1|C|C|9032DU4|1|C|C|9030BPh
2DU4|1|C|C|9032DU4|1|C|G|969cWW
2DU4|1|C|C|9032DU4|1|C|G|970s55
2DU4|1|C|C|903||||4_5552DU4|1|C|A|904||||4_555s35
2DU4|1|C|C|903||||4_5552DU4|1|C|C|902||||4_555ncHW
2DU4|1|C|C|903||||4_5552DU4|1|C|C|903||||4_5550BPh
2DU4|1|C|C|903||||4_5552DU4|1|C|G|969||||4_555cWW
2DU4|1|C|C|903||||4_5552DU4|1|C|G|970||||4_555s55
2DU4|1|C|C|9112DU4|1|C|A|912s35
2DU4|1|C|C|9112DU4|1|C|C|9110BPh
2DU4|1|C|C|9112DU4|1|C|G|910s53
2DU4|1|C|C|9112DU4|1|C|G|923cWW
2DU4|1|C|C|911||||4_5552DU4|1|C|A|912||||4_555s35
2DU4|1|C|C|911||||4_5552DU4|1|C|C|911||||4_5550BPh
2DU4|1|C|C|911||||4_5552DU4|1|C|G|910||||4_555s53
2DU4|1|C|C|911||||4_5552DU4|1|C|G|923||||4_555cWW
2DU4|1|C|C|9192DU4|1|C|C|9190BPh
2DU4|1|C|C|9192DU4|1|C|G|9187BPh
2DU4|1|C|C|9192DU4|1|C|U|920s35
2DU4|1|C|C|919||||4_5552DU4|1|C|C|919||||4_5550BPh
2DU4|1|C|C|919||||4_5552DU4|1|C|G|918||||4_5557BPh
2DU4|1|C|C|919||||4_5552DU4|1|C|U|920||||4_555s35
2DU4|1|C|C|9242DU4|1|C|C|9240BPh
2DU4|1|C|C|9242DU4|1|C|G|910cWW
2DU4|1|C|C|9242DU4|1|C|G|923s53
2DU4|1|C|C|9242DU4|1|C|G|925s35
2DU4|1|C|C|924||||4_5552DU4|1|C|C|924||||4_5550BPh
2DU4|1|C|C|924||||4_5552DU4|1|C|G|910||||4_555cWW
2DU4|1|C|C|924||||4_5552DU4|1|C|G|923||||4_555s53
2DU4|1|C|C|924||||4_5552DU4|1|C|G|925||||4_555s35
2DU4|1|C|C|9272DU4|1|C|C|9270BPh
2DU4|1|C|C|9272DU4|1|C|G|926s53
2DU4|1|C|C|9272DU4|1|C|G|928ns35
2DU4|1|C|C|9272DU4|1|C|G|941cWW
2DU4|1|C|C|927||||4_5552DU4|1|C|C|927||||4_5550BPh
2DU4|1|C|C|927||||4_5552DU4|1|C|G|926||||4_555s53
2DU4|1|C|C|927||||4_5552DU4|1|C|G|928||||4_555ns35
2DU4|1|C|C|927||||4_5552DU4|1|C|G|941||||4_555cWW
2DU4|1|C|C|9312DU4|1|C|A|930s53
2DU4|1|C|C|9312DU4|1|C|A|937cWW
2DU4|1|C|C|9312DU4|1|C|C|9310BPh
2DU4|1|C|C|931||||4_5552DU4|1|C|A|930||||4_555s53
2DU4|1|C|C|931||||4_5552DU4|1|C|A|937||||4_555cWW
2DU4|1|C|C|931||||4_5552DU4|1|C|C|931||||4_5550BPh
2DU4|1|C|C|9342DU4|1|C|C|9340BPh
2DU4|1|C|C|934||||4_5552DU4|1|C|C|934||||4_5550BPh
2DU4|1|C|C|9392DU4|1|C|C|9390BPh
2DU4|1|C|C|9392DU4|1|C|C|940s35n0BP
2DU4|1|C|C|9392DU4|1|C|G|929cWW
2DU4|1|C|C|9392DU4|1|C|U|938s53
2DU4|1|C|C|939||||4_5552DU4|1|C|C|939||||4_5550BPh
2DU4|1|C|C|939||||4_5552DU4|1|C|C|940||||4_555s35n0BP
2DU4|1|C|C|939||||4_5552DU4|1|C|G|929||||4_555cWW
2DU4|1|C|C|939||||4_5552DU4|1|C|U|938||||4_555s53
2DU4|1|C|C|9402DU4|1|C|C|939s53
2DU4|1|C|C|9402DU4|1|C|C|9400BPh
2DU4|1|C|C|9402DU4|1|C|G|928cWW
2DU4|1|C|C|9402DU4|1|C|G|929s55
2DU4|1|C|C|9402DU4|1|C|G|941ns35
2DU4|1|C|C|940||||4_5552DU4|1|C|C|939||||4_555s53
2DU4|1|C|C|940||||4_5552DU4|1|C|C|940||||4_5550BPh
2DU4|1|C|C|940||||4_5552DU4|1|C|G|928||||4_555cWW
2DU4|1|C|C|940||||4_5552DU4|1|C|G|929||||4_555s55
2DU4|1|C|C|940||||4_5552DU4|1|C|G|941||||4_555ns35
2DU4|1|C|C|9422DU4|1|C|C|942n0BP
2DU4|1|C|C|9422DU4|1|C|G|925ncWW
2DU4|1|C|C|9422DU4|1|C|G|926ns55
2DU4|1|C|C|9422DU4|1|C|G|941s53
2DU4|1|C|C|942||||4_5552DU4|1|C|C|942||||4_555n0BP
2DU4|1|C|C|942||||4_5552DU4|1|C|G|925||||4_555ncWW
2DU4|1|C|C|942||||4_5552DU4|1|C|G|926||||4_555ns55
2DU4|1|C|C|942||||4_5552DU4|1|C|G|941||||4_555s53
2DU4|1|C|C|9472DU4|1|C|A|946s53
2DU4|1|C|C|9472DU4|1|C|A|958s35
2DU4|1|C|C|9472DU4|1|C|C|9470BPh
2DU4|1|C|C|9472DU4|1|C|G|915ntWW
2DU4|1|C|C|9472DU4|1|C|U|945ncHS
2DU4|1|C|C|947||||4_5552DU4|1|C|A|946||||4_555s53
2DU4|1|C|C|947||||4_5552DU4|1|C|A|958||||4_555s35
2DU4|1|C|C|947||||4_5552DU4|1|C|C|947||||4_5550BPh
2DU4|1|C|C|947||||4_5552DU4|1|C|G|915||||4_555ntWW
2DU4|1|C|C|947||||4_5552DU4|1|C|U|945||||4_555ncHS
2DU4|1|C|C|9482DU4|1|C|C|948n0BP
2DU4|1|C|C|9482DU4|1|C|C|949s35
2DU4|1|C|C|9482DU4|1|C|G|907s53
2DU4|1|C|C|9482DU4|1|C|G|964cWW
2DU4|1|C|C|948||||4_5552DU4|1|C|C|948||||4_555n0BP
2DU4|1|C|C|948||||4_5552DU4|1|C|C|949||||4_555s35
2DU4|1|C|C|948||||4_5552DU4|1|C|G|907||||4_555s53
2DU4|1|C|C|948||||4_5552DU4|1|C|G|964||||4_555cWW
2DU4|1|C|C|9492DU4|1|C|C|948s53
2DU4|1|C|C|9492DU4|1|C|C|9490BPh
2DU4|1|C|C|9492DU4|1|C|C|950s35
2DU4|1|C|C|9492DU4|1|C|G|963cWW
2DU4|1|C|C|9492DU4|1|C|G|964s55
2DU4|1|C|C|949||||4_5552DU4|1|C|C|948||||4_555s53
2DU4|1|C|C|949||||4_5552DU4|1|C|C|949||||4_5550BPh
2DU4|1|C|C|949||||4_5552DU4|1|C|C|950||||4_555s35
2DU4|1|C|C|949||||4_5552DU4|1|C|G|963||||4_555cWW
2DU4|1|C|C|949||||4_5552DU4|1|C|G|964||||4_555s55
2DU4|1|C|C|9502DU4|1|C|C|949s53
2DU4|1|C|C|9502DU4|1|C|C|9500BPh
2DU4|1|C|C|9502DU4|1|C|G|951s35
2DU4|1|C|C|9502DU4|1|C|G|962cWW
2DU4|1|C|C|9502DU4|1|C|G|963s55
2DU4|1|C|C|950||||4_5552DU4|1|C|C|949||||4_555s53
2DU4|1|C|C|950||||4_5552DU4|1|C|C|950||||4_5550BPh
2DU4|1|C|C|950||||4_5552DU4|1|C|G|951||||4_555s35
2DU4|1|C|C|950||||4_5552DU4|1|C|G|962||||4_555cWW
2DU4|1|C|C|950||||4_5552DU4|1|C|G|963||||4_555s55
2DU4|1|C|C|9552DU4|1|C|C|9550BPh
2DU4|1|C|C|9552DU4|1|C|G|918cWW
2DU4|1|C|C|9552DU4|1|C|G|956s35
2DU4|1|C|C|955||||4_5552DU4|1|C|C|955||||4_5550BPh
2DU4|1|C|C|955||||4_5552DU4|1|C|G|918||||4_555cWW
2DU4|1|C|C|955||||4_5552DU4|1|C|G|956||||4_555s35
2DU4|1|C|C|9602DU4|1|C|A|957s53
2DU4|1|C|C|9602DU4|1|C|C|9600BPh
2DU4|1|C|C|9602DU4|1|C|C|961s35
2DU4|1|C|C|9602DU4|1|C|G|952cWW
2DU4|1|C|C|9602DU4|1|C|U|9599BPh
2DU4|1|C|C|960||||4_5552DU4|1|C|A|957||||4_555s53
2DU4|1|C|C|960||||4_5552DU4|1|C|C|960||||4_5550BPh
2DU4|1|C|C|960||||4_5552DU4|1|C|C|961||||4_555s35
2DU4|1|C|C|960||||4_5552DU4|1|C|G|952||||4_555cWW
2DU4|1|C|C|960||||4_5552DU4|1|C|U|959||||4_5559BPh
2DU4|1|C|C|9612DU4|1|C|C|960s53
2DU4|1|C|C|9612DU4|1|C|C|9610BPh
2DU4|1|C|C|9612DU4|1|C|G|951cWW
2DU4|1|C|C|9612DU4|1|C|G|952s55
2DU4|1|C|C|9612DU4|1|C|G|962s35
2DU4|1|C|C|961||||4_5552DU4|1|C|C|960||||4_555s53
2DU4|1|C|C|961||||4_5552DU4|1|C|C|961||||4_5550BPh
2DU4|1|C|C|961||||4_5552DU4|1|C|G|951||||4_555cWW
2DU4|1|C|C|961||||4_5552DU4|1|C|G|952||||4_555s55
2DU4|1|C|C|961||||4_5552DU4|1|C|G|962||||4_555s35
2DU4|1|C|C|9652DU4|1|C|C|9650BPh
2DU4|1|C|C|9652DU4|1|C|C|966s35
2DU4|1|C|C|9652DU4|1|C|G|907ncWW
2DU4|1|C|C|9652DU4|1|C|G|964s53
2DU4|1|C|C|965||||4_5552DU4|1|C|C|965||||4_5550BPh
2DU4|1|C|C|965||||4_5552DU4|1|C|C|966||||4_555s35
2DU4|1|C|C|965||||4_5552DU4|1|C|G|907||||4_555ncWW
2DU4|1|C|C|965||||4_5552DU4|1|C|G|964||||4_555s53
2DU4|1|C|C|9662DU4|1|C|C|965s53
2DU4|1|C|C|9662DU4|1|C|C|9660BPh
2DU4|1|C|C|9662DU4|1|C|C|967s35
2DU4|1|C|C|9662DU4|1|C|G|906cWW
2DU4|1|C|C|9662DU4|1|C|G|907ns55
2DU4|1|C|C|966||||4_5552DU4|1|C|C|965||||4_555s53
2DU4|1|C|C|966||||4_5552DU4|1|C|C|966||||4_5550BPh
2DU4|1|C|C|966||||4_5552DU4|1|C|C|967||||4_555s35
2DU4|1|C|C|966||||4_5552DU4|1|C|G|906||||4_555cWW
2DU4|1|C|C|966||||4_5552DU4|1|C|G|907||||4_555ns55
2DU4|1|C|C|9672DU4|1|C|C|966s53
2DU4|1|C|C|9672DU4|1|C|C|9670BPh
2DU4|1|C|C|9672DU4|1|C|G|905cWW
2DU4|1|C|C|9672DU4|1|C|G|906s55
2DU4|1|C|C|9672DU4|1|C|U|968s35n0BP
2DU4|1|C|C|967||||4_5552DU4|1|C|C|966||||4_555s53
2DU4|1|C|C|967||||4_5552DU4|1|C|C|967||||4_5550BPh
2DU4|1|C|C|967||||4_5552DU4|1|C|G|905||||4_555cWW
2DU4|1|C|C|967||||4_5552DU4|1|C|G|906||||4_555s55
2DU4|1|C|C|967||||4_5552DU4|1|C|U|968||||4_555s35n0BP
2DU4|1|C|C|9712DU4|1|C|C|9710BPh
2DU4|1|C|C|9712DU4|1|C|G|901cWW
2DU4|1|C|C|9712DU4|1|C|G|970s53
2DU4|1|C|C|971||||4_5552DU4|1|C|C|971||||4_5550BPh
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2DU4|1|C|U|921||||4_5552DU4|1|C|G|913||||4_555ntHS
2DU4|1|C|U|921||||4_5552DU4|1|C|U|922||||4_555s35
2DU4|1|C|U|9222DU4|1|C|A|912cWW
2DU4|1|C|U|9222DU4|1|C|G|909ns53
2DU4|1|C|U|9222DU4|1|C|G|923ns35n0BP
2DU4|1|C|U|9222DU4|1|C|U|921s53
2DU4|1|C|U|9222DU4|1|C|U|9220BPh
2DU4|1|C|U|922||||4_5552DU4|1|C|A|912||||4_555cWW
2DU4|1|C|U|922||||4_5552DU4|1|C|G|909||||4_555ns53
2DU4|1|C|U|922||||4_5552DU4|1|C|G|923||||4_555ns35n0BP
2DU4|1|C|U|922||||4_5552DU4|1|C|U|921||||4_555s53
2DU4|1|C|U|922||||4_5552DU4|1|C|U|922||||4_5550BPh
2DU4|1|C|U|9322DU4|1|C|U|9320BPh
2DU4|1|C|U|932||||4_5552DU4|1|C|U|932||||4_5550BPh
2DU4|1|C|U|9382DU4|1|C|A|930cWW
2DU4|1|C|U|9382DU4|1|C|A|937s53
2DU4|1|C|U|9382DU4|1|C|C|939s35
2DU4|1|C|U|9382DU4|1|C|U|9380BPh
2DU4|1|C|U|938||||4_5552DU4|1|C|A|930||||4_555cWW
2DU4|1|C|U|938||||4_5552DU4|1|C|A|937||||4_555s53
2DU4|1|C|U|938||||4_5552DU4|1|C|C|939||||4_555s35
2DU4|1|C|U|938||||4_5552DU4|1|C|U|938||||4_5550BPh
2DU4|1|C|U|9432DU4|1|C|U|945
2DU4|1|C|U|943||||4_5552DU4|1|C|U|945||||4_555
2DU4|1|C|U|9442DU4|1|C|G|909
2DU4|1|C|U|944||||4_5552DU4|1|C|G|909||||4_555
2DU4|1|C|U|9452DU4|1|C|C|947ncSH
2DU4|1|C|U|945||||4_5552DU4|1|C|C|947||||4_555ncSH
2DU4|1|C|U|9532DU4|1|C|A|957tWH
2DU4|1|C|U|9532DU4|1|C|G|952s53
2DU4|1|C|U|9532DU4|1|C|U|9530BPh
2DU4|1|C|U|9532DU4|1|C|U|954s35
2DU4|1|C|U|953||||4_5552DU4|1|C|A|957||||4_555tWH
2DU4|1|C|U|953||||4_5552DU4|1|C|G|952||||4_555s53
2DU4|1|C|U|953||||4_5552DU4|1|C|U|953||||4_5550BPh
2DU4|1|C|U|953||||4_5552DU4|1|C|U|954||||4_555s35
2DU4|1|C|U|9542DU4|1|C|A|9575BPh
2DU4|1|C|U|9542DU4|1|C|G|917tSW
2DU4|1|C|U|9542DU4|1|C|U|953s53
2DU4|1|C|U|9542DU4|1|C|U|9540BPh
2DU4|1|C|U|954||||4_5552DU4|1|C|A|957||||4_5555BPh
2DU4|1|C|U|954||||4_5552DU4|1|C|G|917||||4_555tSW
2DU4|1|C|U|954||||4_5552DU4|1|C|U|953||||4_555s53
2DU4|1|C|U|954||||4_5552DU4|1|C|U|954||||4_5550BPh
2DU4|1|C|U|9592DU4|1|C|A|957
2DU4|1|C|U|9592DU4|1|C|A|958s53n9BP
2DU4|1|C|U|9592DU4|1|C|C|960
2DU4|1|C|U|9592DU4|1|C|G|9185BPh
2DU4|1|C|U|9592DU4|1|C|U|9590BPh
2DU4|1|C|U|959||||4_5552DU4|1|C|A|957||||4_555
2DU4|1|C|U|959||||4_5552DU4|1|C|A|958||||4_555s53n9BP
2DU4|1|C|U|959||||4_5552DU4|1|C|C|960||||4_555
2DU4|1|C|U|959||||4_5552DU4|1|C|G|918||||4_5555BPh
2DU4|1|C|U|959||||4_5552DU4|1|C|U|959||||4_5550BPh
2DU4|1|C|U|9682DU4|1|C|A|904cWW
2DU4|1|C|U|9682DU4|1|C|C|967s53
2DU4|1|C|U|9682DU4|1|C|G|905ns55
2DU4|1|C|U|9682DU4|1|C|G|969ns35
2DU4|1|C|U|9682DU4|1|C|U|9680BPh
2DU4|1|C|U|968||||4_5552DU4|1|C|A|904||||4_555cWW
2DU4|1|C|U|968||||4_5552DU4|1|C|C|967||||4_555s53
2DU4|1|C|U|968||||4_5552DU4|1|C|G|905||||4_555ns55
2DU4|1|C|U|968||||4_5552DU4|1|C|G|969||||4_555ns35
2DU4|1|C|U|968||||4_5552DU4|1|C|U|968||||4_5550BPh


Base-PairsCount (46)Relative Frequency
cWW380.826
tWH40.087
tWS20.043
tSS20.043
Base-PhosphateCount (104)Relative Frequency
5BPh40.038
7BPh40.038
9BPh20.019
0BPh940.904
Base-StackingCount (56)Relative Frequency
s3320.036
s53260.464
s55280.500

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)