NDB ID: 2F87 PDB ID: 2F87 
RNA Base-Pairs, Stacking and other pairwise interactions
CSV Format| Nucleotide 1 | Nucleotide 2 | Base-Pairs | Base-Stacking | Base-Phosphate |
|---|
| 2F87|1|A|A|6 | 2F87|1|A|A|6 | | | 0BPh |
| 2F87|1|A|A|6 | 2F87|1|A|A|7 | | s35 | |
| 2F87|1|A|A|7 | 2F87|1|A|A|6 | | s53 | |
| 2F87|1|A|A|7 | 2F87|1|A|A|7 | | | 0BPh |
| 2F87|1|A|A|7 | 2F87|1|A|G|5 | | ns33 | |
| 2F87|1|A|A|7 | 2F87|1|A|G|8 | | s35 | |
| 2F87|1|A|C|11 | 2F87|1|A|C|11 | | | 0BPh |
| 2F87|1|A|C|11 | 2F87|1|A|C|12 | | s35 | |
| 2F87|1|A|C|11 | 2F87|1|A|G|10 | | s53 | |
| 2F87|1|A|C|11 | 2F87|1|A|G|2 | cWW | | |
| 2F87|1|A|C|12 | 2F87|1|A|C|11 | | s53 | |
| 2F87|1|A|C|12 | 2F87|1|A|C|12 | | | 0BPh |
| 2F87|1|A|C|12 | 2F87|1|A|G|1 | cWW | | |
| 2F87|1|A|C|12 | 2F87|1|A|G|2 | | s55 | |
| 2F87|1|A|C|3 | 2F87|1|A|C|3 | | | 0BPh |
| 2F87|1|A|C|3 | 2F87|1|A|G|10 | cWW | | |
| 2F87|1|A|C|3 | 2F87|1|A|G|2 | | s53 | |
| 2F87|1|A|C|3 | 2F87|1|A|U|4 | | s35 | |
| 2F87|1|A|G|1 | 2F87|1|A|C|12 | cWW | | |
| 2F87|1|A|G|1 | 2F87|1|A|G|1 | | | n0BP |
| 2F87|1|A|G|1 | 2F87|1|A|G|2 | | s35 | |
| 2F87|1|A|G|10 | 2F87|1|A|C|11 | | s35 | |
| 2F87|1|A|G|10 | 2F87|1|A|C|3 | cWW | | |
| 2F87|1|A|G|10 | 2F87|1|A|G|10 | | | 0BPh |
| 2F87|1|A|G|10 | 2F87|1|A|G|9 | | s53 | |
| 2F87|1|A|G|10 | 2F87|1|A|U|4 | | s55 | |
| 2F87|1|A|G|2 | 2F87|1|A|C|11 | cWW | | |
| 2F87|1|A|G|2 | 2F87|1|A|C|12 | | s55 | |
| 2F87|1|A|G|2 | 2F87|1|A|C|3 | | s35 | |
| 2F87|1|A|G|2 | 2F87|1|A|G|1 | | s53 | |
| 2F87|1|A|G|2 | 2F87|1|A|G|2 | | | n0BP |
| 2F87|1|A|G|5 | 2F87|1|A|A|7 | | ns33 | |
| 2F87|1|A|G|5 | 2F87|1|A|G|8 | ntSH | | 3BPh |
| 2F87|1|A|G|5 | 2F87|1|A|G|9 | | ns55 | |
| 2F87|1|A|G|5 | 2F87|1|A|U|4 | | s53 | |
| 2F87|1|A|G|8 | 2F87|1|A|A|7 | | s53 | |
| 2F87|1|A|G|8 | 2F87|1|A|G|5 | ntHS | | |
| 2F87|1|A|G|8 | 2F87|1|A|G|8 | | | n0BP |
| 2F87|1|A|G|8 | 2F87|1|A|G|9 | | s35 | |
| 2F87|1|A|G|9 | 2F87|1|A|G|10 | | s35 | |
| 2F87|1|A|G|9 | 2F87|1|A|G|5 | | ns55 | |
| 2F87|1|A|G|9 | 2F87|1|A|G|8 | | s53 | |
| 2F87|1|A|G|9 | 2F87|1|A|U|4 | cWW | | |
| 2F87|1|A|U|4 | 2F87|1|A|C|3 | | s53 | |
| 2F87|1|A|U|4 | 2F87|1|A|G|10 | | s55 | |
| 2F87|1|A|U|4 | 2F87|1|A|G|5 | | s35 | |
| 2F87|1|A|U|4 | 2F87|1|A|G|9 | cWW | | |
| 2F87|1|A|U|4 | 2F87|1|A|U|4 | | | n0BP |
| Base-Pairs | Count (4) | Relative Frequency |
|---|
| cWW | 4 | 1.000 |
| Base-Phosphate | Count (7) | Relative Frequency |
|---|
| 3BPh | 1 | 0.143 |
| 0BPh | 6 | 0.857 |
| Base-Stacking | Count (6) | Relative Frequency |
|---|
| s53 | 4 | 0.667 |
| s55 | 2 | 0.333 |
