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As of 1-Dec-2021 number of released structures: 11785
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NDB ID: 2FY1  PDB ID: 2FY1 


RNA Base-Pairs, Stacking and other pairwise interactions

CSV Format

Nucleotide 1Nucleotide 2Base-PairsBase-StackingBase-Phosphate
2FY1|1|B|A|1112FY1|1|B|A|1110BPh
2FY1|1|B|A|1112FY1|1|B|C|112s35
2FY1|1|B|A|1112FY1|1|B|C|128ns55
2FY1|1|B|A|1112FY1|1|B|G|110s53
2FY1|1|B|A|1112FY1|1|B|U|127cWW
2FY1|1|B|A|1182FY1|1|B|C|117s53
2FY1|1|B|A|1212FY1|1|B|A|120
2FY1|1|B|A|1232FY1|1|B|A|1230BPh
2FY1|1|B|A|1232FY1|1|B|C|124s35
2FY1|1|B|A|1232FY1|1|B|G|122s53
2FY1|1|B|A|1232FY1|1|B|U|115cWW
2FY1|1|B|A|1252FY1|1|B|A|1250BPh
2FY1|1|B|A|1252FY1|1|B|C|124s53
2FY1|1|B|A|1252FY1|1|B|G|114s55
2FY1|1|B|A|1252FY1|1|B|G|126s35
2FY1|1|B|A|1252FY1|1|B|U|113cWW
2FY1|1|B|C|1122FY1|1|B|A|111s53
2FY1|1|B|C|1122FY1|1|B|C|1120BPh
2FY1|1|B|C|1122FY1|1|B|G|126cWW
2FY1|1|B|C|1122FY1|1|B|U|113s35
2FY1|1|B|C|1162FY1|1|B|C|1160BPh
2FY1|1|B|C|1162FY1|1|B|C|117s35
2FY1|1|B|C|1162FY1|1|B|G|122cWW
2FY1|1|B|C|1162FY1|1|B|U|115s53
2FY1|1|B|C|1172FY1|1|B|A|118s35
2FY1|1|B|C|1172FY1|1|B|C|116s538BPh
2FY1|1|B|C|1172FY1|1|B|C|1170BPh
2FY1|1|B|C|1192FY1|1|B|C|1190BPh
2FY1|1|B|C|1242FY1|1|B|A|123s53
2FY1|1|B|C|1242FY1|1|B|A|125s35
2FY1|1|B|C|1242FY1|1|B|C|1240BPh
2FY1|1|B|C|1242FY1|1|B|G|114cWW
2FY1|1|B|C|1282FY1|1|B|A|111ns55
2FY1|1|B|C|1282FY1|1|B|C|1280BPh
2FY1|1|B|C|1282FY1|1|B|C|129s35
2FY1|1|B|C|1282FY1|1|B|G|110cWW
2FY1|1|B|C|1282FY1|1|B|U|127s53
2FY1|1|B|C|1292FY1|1|B|C|128s53
2FY1|1|B|C|1292FY1|1|B|C|1290BPh
2FY1|1|B|C|1292FY1|1|B|G|109cWW
2FY1|1|B|C|1292FY1|1|B|G|110s55
2FY1|1|B|G|1092FY1|1|B|C|129cWW
2FY1|1|B|G|1092FY1|1|B|G|1090BPh
2FY1|1|B|G|1092FY1|1|B|G|110s35
2FY1|1|B|G|1102FY1|1|B|A|111s35
2FY1|1|B|G|1102FY1|1|B|C|128cWW
2FY1|1|B|G|1102FY1|1|B|C|129s55
2FY1|1|B|G|1102FY1|1|B|G|109s53
2FY1|1|B|G|1102FY1|1|B|G|1100BPh
2FY1|1|B|G|1142FY1|1|B|A|125s55
2FY1|1|B|G|1142FY1|1|B|C|124cWW
2FY1|1|B|G|1142FY1|1|B|G|1140BPh
2FY1|1|B|G|1142FY1|1|B|U|113s53
2FY1|1|B|G|1142FY1|1|B|U|115s35
2FY1|1|B|G|1222FY1|1|B|A|123s35
2FY1|1|B|G|1222FY1|1|B|C|116cWW
2FY1|1|B|G|1262FY1|1|B|A|125s53
2FY1|1|B|G|1262FY1|1|B|C|112cWW
2FY1|1|B|G|1262FY1|1|B|G|1260BPh
2FY1|1|B|G|1262FY1|1|B|U|113s55
2FY1|1|B|G|1262FY1|1|B|U|127s35
2FY1|1|B|U|1132FY1|1|B|A|125cWW
2FY1|1|B|U|1132FY1|1|B|C|112s53
2FY1|1|B|U|1132FY1|1|B|G|114s35
2FY1|1|B|U|1132FY1|1|B|G|126s55
2FY1|1|B|U|1132FY1|1|B|U|1130BPh
2FY1|1|B|U|1152FY1|1|B|A|123cWW
2FY1|1|B|U|1152FY1|1|B|C|116s35
2FY1|1|B|U|1152FY1|1|B|G|114s53
2FY1|1|B|U|1152FY1|1|B|U|1150BPh
2FY1|1|B|U|1272FY1|1|B|A|111cWW
2FY1|1|B|U|1272FY1|1|B|C|128s35
2FY1|1|B|U|1272FY1|1|B|G|126s53
2FY1|1|B|U|1272FY1|1|B|U|1270BPh


Base-PairsCount (8)Relative Frequency
cWW81.000
Base-PhosphateCount (18)Relative Frequency
8BPh10.056
0BPh170.944
Base-StackingCount (10)Relative Frequency
s5370.700
s5530.300

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)