2JA6: FR3D Base Pair Interactions

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As of 18-May-2022 number of released structures: 12082

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NDB ID: NA0294 PDB ID: 2JA6

Nucleotide 1	Nucleotide 2	Base-Stacking	Base-Phosphate
2JA6\|1\|P\|A\|4	2JA6\|1\|P\|A\|4		0BPh
2JA6\|1\|P\|A\|4	2JA6\|1\|P\|C\|5	s35
2JA6\|1\|P\|A\|4	2JA6\|1\|P\|G\|3	s53
2JA6\|1\|P\|A\|7	2JA6\|1\|P\|A\|7		0BPh
2JA6\|1\|P\|A\|7	2JA6\|1\|P\|C\|6	s53
2JA6\|1\|P\|A\|7	2JA6\|1\|P\|G\|8	s35
2JA6\|1\|P\|C\|2	2JA6\|1\|P\|C\|2		0BPh
2JA6\|1\|P\|C\|2	2JA6\|1\|P\|G\|3	s35
2JA6\|1\|P\|C\|2	2JA6\|1\|P\|U\|1	s53
2JA6\|1\|P\|C\|5	2JA6\|1\|P\|A\|4	s53
2JA6\|1\|P\|C\|5	2JA6\|1\|P\|C\|5		0BPh
2JA6\|1\|P\|C\|5	2JA6\|1\|P\|C\|6	s35
2JA6\|1\|P\|C\|6	2JA6\|1\|P\|A\|7	s35
2JA6\|1\|P\|C\|6	2JA6\|1\|P\|C\|5	s53
2JA6\|1\|P\|C\|6	2JA6\|1\|P\|C\|6		0BPh
2JA6\|1\|P\|G\|3	2JA6\|1\|P\|A\|4	s35
2JA6\|1\|P\|G\|3	2JA6\|1\|P\|C\|2	s53
2JA6\|1\|P\|G\|3	2JA6\|1\|P\|G\|3		0BPh
2JA6\|1\|P\|G\|8	2JA6\|1\|P\|A\|7	s53
2JA6\|1\|P\|G\|8	2JA6\|1\|P\|G\|8		0BPh
2JA6\|1\|P\|G\|8	2JA6\|1\|P\|G\|9	s35
2JA6\|1\|P\|G\|9	2JA6\|1\|P\|G\|8	s53
2JA6\|1\|P\|G\|9	2JA6\|1\|P\|G\|9		0BPh
2JA6\|1\|P\|U\|0	2JA6\|1\|P\|U\|0		0BPh
2JA6\|1\|P\|U\|0	2JA6\|1\|P\|U\|1	s35
2JA6\|1\|P\|U\|1	2JA6\|1\|P\|C\|2	s35
2JA6\|1\|P\|U\|1	2JA6\|1\|P\|U\|0	s53
2JA6\|1\|P\|U\|1	2JA6\|1\|P\|U\|1		0BPh

Base-Pairs	Count (0)	Relative Frequency

Base-Phosphate	Count (10)	Relative Frequency
0BPh	10	1.000

Base-Stacking	Count (3)	Relative Frequency
s53	3	1.000

Nucleotide 1	Nucleotide 2	Base-Stacking	Base-Phosphate
2JA6\|1\|P\|A\|4	2JA6\|1\|P\|A\|4		0BPh
2JA6\|1\|P\|A\|4	2JA6\|1\|P\|C\|5	s35
2JA6\|1\|P\|A\|4	2JA6\|1\|P\|G\|3	s53
2JA6\|1\|P\|A\|7	2JA6\|1\|P\|A\|7		0BPh
2JA6\|1\|P\|A\|7	2JA6\|1\|P\|C\|6	s53
2JA6\|1\|P\|A\|7	2JA6\|1\|P\|G\|8	s35
2JA6\|1\|P\|C\|2	2JA6\|1\|P\|C\|2		0BPh
2JA6\|1\|P\|C\|2	2JA6\|1\|P\|G\|3	s35
2JA6\|1\|P\|C\|2	2JA6\|1\|P\|U\|1	s53
2JA6\|1\|P\|C\|5	2JA6\|1\|P\|A\|4	s53
2JA6\|1\|P\|C\|5	2JA6\|1\|P\|C\|5		0BPh
2JA6\|1\|P\|C\|5	2JA6\|1\|P\|C\|6	s35
2JA6\|1\|P\|C\|6	2JA6\|1\|P\|A\|7	s35
2JA6\|1\|P\|C\|6	2JA6\|1\|P\|C\|5	s53
2JA6\|1\|P\|C\|6	2JA6\|1\|P\|C\|6		0BPh
2JA6\|1\|P\|G\|3	2JA6\|1\|P\|A\|4	s35
2JA6\|1\|P\|G\|3	2JA6\|1\|P\|C\|2	s53
2JA6\|1\|P\|G\|3	2JA6\|1\|P\|G\|3		0BPh
2JA6\|1\|P\|G\|8	2JA6\|1\|P\|A\|7	s53
2JA6\|1\|P\|G\|8	2JA6\|1\|P\|G\|8		0BPh
2JA6\|1\|P\|G\|8	2JA6\|1\|P\|G\|9	s35
2JA6\|1\|P\|G\|9	2JA6\|1\|P\|G\|8	s53
2JA6\|1\|P\|G\|9	2JA6\|1\|P\|G\|9		0BPh
2JA6\|1\|P\|U\|0	2JA6\|1\|P\|U\|0		0BPh
2JA6\|1\|P\|U\|0	2JA6\|1\|P\|U\|1	s35
2JA6\|1\|P\|U\|1	2JA6\|1\|P\|C\|2	s35
2JA6\|1\|P\|U\|1	2JA6\|1\|P\|U\|0	s53
2JA6\|1\|P\|U\|1	2JA6\|1\|P\|U\|1		0BPh