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As of 18-May-2022 number of released structures: 12082
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NDB ID: 2JSG  PDB ID: 2JSG 


RNA Base-Pairs, Stacking and other pairwise interactions

CSV Format

Nucleotide 1Nucleotide 2Base-PairsBase-StackingBase-Phosphate
2JSG|1|A|A|352JSG|1|A|A|350BPh
2JSG|1|A|A|352JSG|1|A|C|36s35
2JSG|1|A|A|382JSG|1|A|C|32cWW
2JSG|1|A|A|382JSG|1|A|G|39s35
2JSG|1|A|A|412JSG|1|A|A|410BPh
2JSG|1|A|A|412JSG|1|A|C|30ns55
2JSG|1|A|A|412JSG|1|A|G|40s53
2JSG|1|A|A|412JSG|1|A|G|42s35
2JSG|1|A|A|412JSG|1|A|U|29cWW
2JSG|1|A|C|272JSG|1|A|C|270BPh
2JSG|1|A|C|272JSG|1|A|C|28s35
2JSG|1|A|C|272JSG|1|A|G|43cWW
2JSG|1|A|C|282JSG|1|A|C|27s53
2JSG|1|A|C|282JSG|1|A|C|280BPh
2JSG|1|A|C|282JSG|1|A|G|42cWW
2JSG|1|A|C|282JSG|1|A|G|43s55
2JSG|1|A|C|282JSG|1|A|U|29s35
2JSG|1|A|C|302JSG|1|A|A|41ns55
2JSG|1|A|C|302JSG|1|A|C|300BPh
2JSG|1|A|C|302JSG|1|A|C|31s35
2JSG|1|A|C|302JSG|1|A|G|40cWW
2JSG|1|A|C|302JSG|1|A|U|29s53
2JSG|1|A|C|312JSG|1|A|C|30s53
2JSG|1|A|C|312JSG|1|A|C|310BPh
2JSG|1|A|C|312JSG|1|A|C|32ns35
2JSG|1|A|C|312JSG|1|A|G|39cWW
2JSG|1|A|C|312JSG|1|A|G|40s55
2JSG|1|A|C|322JSG|1|A|A|38cWW
2JSG|1|A|C|322JSG|1|A|C|31ns53
2JSG|1|A|C|322JSG|1|A|C|320BPh
2JSG|1|A|C|322JSG|1|A|U|33s35
2JSG|1|A|C|362JSG|1|A|A|35s53
2JSG|1|A|C|362JSG|1|A|C|36n0BP
2JSG|1|A|G|392JSG|1|A|A|38s53
2JSG|1|A|G|392JSG|1|A|C|31cWW
2JSG|1|A|G|392JSG|1|A|G|390BPh
2JSG|1|A|G|392JSG|1|A|G|40s35
2JSG|1|A|G|402JSG|1|A|A|41s35
2JSG|1|A|G|402JSG|1|A|C|30cWW
2JSG|1|A|G|402JSG|1|A|C|31s55
2JSG|1|A|G|402JSG|1|A|G|39s53
2JSG|1|A|G|402JSG|1|A|G|400BPh
2JSG|1|A|G|422JSG|1|A|A|41s53
2JSG|1|A|G|422JSG|1|A|C|28cWW
2JSG|1|A|G|422JSG|1|A|G|420BPh
2JSG|1|A|G|422JSG|1|A|G|43s35
2JSG|1|A|G|422JSG|1|A|U|29s55
2JSG|1|A|G|432JSG|1|A|C|27cWW
2JSG|1|A|G|432JSG|1|A|C|28s55
2JSG|1|A|G|432JSG|1|A|G|42s53
2JSG|1|A|G|432JSG|1|A|G|430BPh
2JSG|1|A|U|292JSG|1|A|A|41cWW
2JSG|1|A|U|292JSG|1|A|C|28s53
2JSG|1|A|U|292JSG|1|A|C|30s35
2JSG|1|A|U|292JSG|1|A|G|42s55
2JSG|1|A|U|292JSG|1|A|U|290BPh
2JSG|1|A|U|332JSG|1|A|C|32s53
2JSG|1|A|U|332JSG|1|A|U|330BPh


Base-PairsCount (6)Relative Frequency
cWW61.000
Base-PhosphateCount (13)Relative Frequency
0BPh131.000
Base-StackingCount (5)Relative Frequency
s5320.400
s5530.600

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)