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NDB ID: 2K65  PDB ID: 2K65 

RNA Base-Pairs, Stacking and other pairwise interactions

CSV Format

Nucleotide 1Nucleotide 2Base-PairsBase-StackingBase-Phosphate
2K65|1|A|A|162K65|1|A|A|160BPh
2K65|1|A|A|162K65|1|A|C|15s53
2K65|1|A|A|162K65|1|A|C|17s35
2K65|1|A|A|162K65|1|B|G|63s55
2K65|1|A|A|162K65|1|B|U|62cWW
2K65|1|A|C|152K65|1|A|A|16s35
2K65|1|A|C|152K65|1|A|C|150BPh
2K65|1|A|C|152K65|1|A|G|14s53
2K65|1|A|C|152K65|1|B|G|63cWW
2K65|1|A|C|172K65|1|A|A|16s53
2K65|1|A|C|172K65|1|A|C|170BPh
2K65|1|A|C|172K65|1|A|U|18s35
2K65|1|A|C|172K65|1|B|G|61cWW
2K65|1|A|G|132K65|1|A|G|130BPh
2K65|1|A|G|132K65|1|A|G|14s35
2K65|1|A|G|132K65|1|B|C|65cWW
2K65|1|A|G|142K65|1|A|C|15s35
2K65|1|A|G|142K65|1|A|G|13s53
2K65|1|A|G|142K65|1|A|G|140BPh
2K65|1|A|G|142K65|1|B|C|65s55
2K65|1|A|G|142K65|1|B|U|64cWW
2K65|1|A|G|192K65|1|A|G|19n0BP
2K65|1|A|G|192K65|1|A|U|18s53
2K65|1|A|G|192K65|1|B|A|60s55
2K65|1|A|G|192K65|1|B|C|59cWW
2K65|1|A|U|182K65|1|A|C|17s53
2K65|1|A|U|182K65|1|A|G|19s35
2K65|1|A|U|182K65|1|A|U|180BPh
2K65|1|A|U|182K65|1|B|A|60cWW
2K65|1|A|U|182K65|1|B|G|61s55
2K65|1|B|A|602K65|1|A|G|19s55
2K65|1|B|A|602K65|1|A|U|18cWW
2K65|1|B|A|602K65|1|B|A|600BPh
2K65|1|B|A|602K65|1|B|C|59s53
2K65|1|B|A|602K65|1|B|G|61s35
2K65|1|B|C|592K65|1|A|G|19cWW
2K65|1|B|C|592K65|1|B|A|60s35
2K65|1|B|C|592K65|1|B|C|590BPh
2K65|1|B|C|652K65|1|A|G|13cWW
2K65|1|B|C|652K65|1|A|G|14s55
2K65|1|B|C|652K65|1|B|C|650BPh
2K65|1|B|C|652K65|1|B|U|64s53
2K65|1|B|G|612K65|1|A|C|17cWW
2K65|1|B|G|612K65|1|A|U|18s55
2K65|1|B|G|612K65|1|B|A|60s53
2K65|1|B|G|612K65|1|B|G|610BPh
2K65|1|B|G|612K65|1|B|U|62s35
2K65|1|B|G|632K65|1|A|A|16s55
2K65|1|B|G|632K65|1|A|C|15cWW
2K65|1|B|G|632K65|1|B|G|630BPh
2K65|1|B|G|632K65|1|B|U|62s53
2K65|1|B|G|632K65|1|B|U|64s35
2K65|1|B|U|622K65|1|A|A|16cWW
2K65|1|B|U|622K65|1|B|G|61s53
2K65|1|B|U|622K65|1|B|G|63s35
2K65|1|B|U|622K65|1|B|U|620BPh
2K65|1|B|U|642K65|1|A|G|14cWW
2K65|1|B|U|642K65|1|B|C|65s35
2K65|1|B|U|642K65|1|B|G|63s53
2K65|1|B|U|642K65|1|B|U|640BPh


Base-PairsCount (7)Relative Frequency
cWW71.000
Base-PhosphateCount (13)Relative Frequency
0BPh131.000
Base-StackingCount (10)Relative Frequency
s5360.600
s5540.400

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)

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