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As of 18-May-2022 number of released structures: 12082
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NDB ID: 2K7E  PDB ID: 2K7E 


RNA Base-Pairs, Stacking and other pairwise interactions

CSV Format

Nucleotide 1Nucleotide 2Base-PairsBase-StackingBase-Phosphate
2K7E|1|A|A|102K7E|1|A|A|100BPh
2K7E|1|A|A|102K7E|1|A|A|11s35
2K7E|1|A|A|102K7E|1|A|A|9s53
2K7E|1|A|A|112K7E|1|A|A|10s53
2K7E|1|A|A|112K7E|1|A|A|110BPh
2K7E|1|A|A|112K7E|1|A|G|12s35
2K7E|1|A|A|112K7E|1|B|U|2cWW
2K7E|1|A|A|82K7E|1|A|A|80BPh
2K7E|1|A|A|82K7E|1|A|A|9s35
2K7E|1|A|A|82K7E|1|A|U|7s53
2K7E|1|A|A|82K7E|1|B|A|6s55
2K7E|1|A|A|82K7E|1|B|U|5cWW
2K7E|1|A|A|92K7E|1|A|A|10s35
2K7E|1|A|A|92K7E|1|A|A|8s53
2K7E|1|A|A|92K7E|1|A|A|90BPh
2K7E|1|A|A|92K7E|1|B|U|4cWW
2K7E|1|A|A|92K7E|1|B|U|5ns55
2K7E|1|A|C|22K7E|1|A|C|20BPh
2K7E|1|A|C|22K7E|1|A|G|1s53
2K7E|1|A|C|22K7E|1|A|G|3s35
2K7E|1|A|C|22K7E|1|B|G|11cWW
2K7E|1|A|G|12K7E|1|A|C|2s35
2K7E|1|A|G|12K7E|1|A|G|10BPh
2K7E|1|A|G|12K7E|1|B|C|12cWW
2K7E|1|A|G|122K7E|1|A|A|11s53
2K7E|1|A|G|122K7E|1|A|G|120BPh
2K7E|1|A|G|122K7E|1|B|C|1cWW
2K7E|1|A|G|122K7E|1|B|U|2ns55
2K7E|1|A|G|32K7E|1|A|C|2s53
2K7E|1|A|G|32K7E|1|A|G|30BPh
2K7E|1|A|G|32K7E|1|A|G|4s35
2K7E|1|A|G|32K7E|1|B|G|11s55
2K7E|1|A|G|32K7E|1|B|U|10cWW
2K7E|1|A|G|42K7E|1|A|G|3s53
2K7E|1|A|G|42K7E|1|A|G|40BPh
2K7E|1|A|G|42K7E|1|A|U|5s35
2K7E|1|A|G|42K7E|1|B|C|9cWW
2K7E|1|A|G|62K7E|1|A|G|60BPh
2K7E|1|A|G|62K7E|1|A|U|5s53
2K7E|1|A|G|62K7E|1|A|U|7s35
2K7E|1|A|G|62K7E|1|B|A|7cWW
2K7E|1|A|U|52K7E|1|A|G|4s53
2K7E|1|A|U|52K7E|1|A|G|6s35
2K7E|1|A|U|52K7E|1|A|U|50BPh
2K7E|1|A|U|72K7E|1|A|A|8s35
2K7E|1|A|U|72K7E|1|A|G|6s53
2K7E|1|A|U|72K7E|1|A|U|70BPh
2K7E|1|A|U|72K7E|1|B|A|6cWW
2K7E|1|B|A|62K7E|1|A|A|8s55
2K7E|1|B|A|62K7E|1|A|U|7cWW
2K7E|1|B|A|62K7E|1|B|A|60BPh
2K7E|1|B|A|62K7E|1|B|A|7s35
2K7E|1|B|A|62K7E|1|B|U|5s53
2K7E|1|B|A|72K7E|1|A|G|6cWW
2K7E|1|B|A|72K7E|1|B|A|6s53
2K7E|1|B|A|72K7E|1|B|A|70BPh
2K7E|1|B|C|12K7E|1|A|G|12cWW
2K7E|1|B|C|12K7E|1|B|C|10BPh
2K7E|1|B|C|12K7E|1|B|U|2s35
2K7E|1|B|C|122K7E|1|A|G|1cWW
2K7E|1|B|C|122K7E|1|B|C|120BPh
2K7E|1|B|C|122K7E|1|B|G|11s53
2K7E|1|B|C|92K7E|1|A|G|4cWW
2K7E|1|B|C|92K7E|1|B|C|90BPh
2K7E|1|B|C|92K7E|1|B|U|10s35
2K7E|1|B|G|112K7E|1|A|C|2cWW
2K7E|1|B|G|112K7E|1|A|G|3s55
2K7E|1|B|G|112K7E|1|B|C|12s35
2K7E|1|B|G|112K7E|1|B|G|110BPh
2K7E|1|B|G|112K7E|1|B|U|10s53
2K7E|1|B|U|102K7E|1|A|G|3cWW
2K7E|1|B|U|102K7E|1|B|C|9s53
2K7E|1|B|U|102K7E|1|B|G|11s35
2K7E|1|B|U|102K7E|1|B|U|100BPh
2K7E|1|B|U|22K7E|1|A|A|11cWW
2K7E|1|B|U|22K7E|1|A|G|12ns55
2K7E|1|B|U|22K7E|1|B|C|1s53
2K7E|1|B|U|22K7E|1|B|U|20BPh
2K7E|1|B|U|42K7E|1|A|A|9cWW
2K7E|1|B|U|42K7E|1|B|U|40BPh
2K7E|1|B|U|42K7E|1|B|U|5s35
2K7E|1|B|U|52K7E|1|A|A|8cWW
2K7E|1|B|U|52K7E|1|A|A|9ns55
2K7E|1|B|U|52K7E|1|B|A|6s35
2K7E|1|B|U|52K7E|1|B|U|4s53
2K7E|1|B|U|52K7E|1|B|U|50BPh


Base-PairsCount (10)Relative Frequency
cWW101.000
Base-PhosphateCount (22)Relative Frequency
0BPh221.000
Base-StackingCount (9)Relative Frequency
s5370.778
s5520.222

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)