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As of 11-May-2022 number of released structures: 12077
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NDB ID: 2KX8  PDB ID: 2KX8 

RNA Base-Pairs, Stacking and other pairwise interactions

CSV Format

Nucleotide 1Nucleotide 2Base-PairsBase-StackingBase-Phosphate
2KX8|1|A|A|2962KX8|1|A|A|2960BPh
2KX8|1|A|A|2962KX8|1|A|A|297s35
2KX8|1|A|A|2962KX8|1|A|C|332s55
2KX8|1|A|A|2962KX8|1|A|G|295s53
2KX8|1|A|A|2962KX8|1|A|U|331cWW
2KX8|1|A|A|2972KX8|1|A|A|296s53
2KX8|1|A|A|2972KX8|1|A|A|2970BPh
2KX8|1|A|A|2972KX8|1|A|A|298s35
2KX8|1|A|A|2972KX8|1|A|U|330cWW
2KX8|1|A|A|2972KX8|1|A|U|331s55
2KX8|1|A|A|2982KX8|1|A|A|297s53
2KX8|1|A|A|2982KX8|1|A|A|2980BPh
2KX8|1|A|A|2982KX8|1|A|U|299s35
2KX8|1|A|A|2982KX8|1|A|U|329cWW
2KX8|1|A|A|2982KX8|1|A|U|330s55
2KX8|1|A|A|3012KX8|1|A|A|3010BPh
2KX8|1|A|A|3012KX8|1|A|C|320ns33
2KX8|1|A|A|3012KX8|1|A|G|300s53
2KX8|1|A|A|3012KX8|1|A|G|302s35
2KX8|1|A|A|3012KX8|1|A|U|325cWW
2KX8|1|A|A|3102KX8|1|A|A|3100BPh
2KX8|1|A|A|3102KX8|1|A|C|309s53
2KX8|1|A|A|3102KX8|1|A|G|315s55
2KX8|1|A|A|3102KX8|1|A|U|311s35
2KX8|1|A|A|3172KX8|1|A|A|3170BPh
2KX8|1|A|A|3172KX8|1|A|C|316s53
2KX8|1|A|A|3172KX8|1|A|G|308s55
2KX8|1|A|A|3172KX8|1|A|G|318s35
2KX8|1|A|A|3172KX8|1|A|U|307cWW
2KX8|1|A|C|3042KX8|1|A|C|3040BPh
2KX8|1|A|C|3042KX8|1|A|G|303s53
2KX8|1|A|C|3042KX8|1|A|G|305ns35
2KX8|1|A|C|3042KX8|1|A|G|322cWW
2KX8|1|A|C|3062KX8|1|A|C|3060BPh
2KX8|1|A|C|3062KX8|1|A|G|305s53
2KX8|1|A|C|3062KX8|1|A|G|318cWW
2KX8|1|A|C|3062KX8|1|A|U|307s35
2KX8|1|A|C|3092KX8|1|A|A|310s35
2KX8|1|A|C|3092KX8|1|A|C|3090BPh
2KX8|1|A|C|3092KX8|1|A|G|308s53
2KX8|1|A|C|3092KX8|1|A|G|315cWW
2KX8|1|A|C|3162KX8|1|A|A|317s35
2KX8|1|A|C|3162KX8|1|A|C|3160BPh
2KX8|1|A|C|3162KX8|1|A|G|308cWW
2KX8|1|A|C|3162KX8|1|A|G|315s53
2KX8|1|A|C|3202KX8|1|A|A|301ns33
2KX8|1|A|C|3202KX8|1|A|C|324ncWH
2KX8|1|A|C|3202KX8|1|A|G|302ntWH
2KX8|1|A|C|3202KX8|1|A|G|303ntWH
2KX8|1|A|C|3232KX8|1|A|C|3230BPh
2KX8|1|A|C|3232KX8|1|A|C|324s35
2KX8|1|A|C|3232KX8|1|A|G|303cWW
2KX8|1|A|C|3232KX8|1|A|G|322s53
2KX8|1|A|C|3242KX8|1|A|C|320ncHW
2KX8|1|A|C|3242KX8|1|A|C|323s53
2KX8|1|A|C|3242KX8|1|A|C|3240BPh
2KX8|1|A|C|3242KX8|1|A|G|302cWW
2KX8|1|A|C|3242KX8|1|A|G|303s55
2KX8|1|A|C|3242KX8|1|A|U|325s35
2KX8|1|A|C|3282KX8|1|A|C|3280BPh
2KX8|1|A|C|3282KX8|1|A|U|299cWW
2KX8|1|A|C|3282KX8|1|A|U|327s53
2KX8|1|A|C|3282KX8|1|A|U|329s35
2KX8|1|A|C|3322KX8|1|A|A|296s55
2KX8|1|A|C|3322KX8|1|A|C|3320BPh
2KX8|1|A|C|3322KX8|1|A|C|333s35
2KX8|1|A|C|3322KX8|1|A|G|295cWW
2KX8|1|A|C|3322KX8|1|A|U|331s53
2KX8|1|A|C|3332KX8|1|A|C|332s53
2KX8|1|A|C|3332KX8|1|A|C|3330BPh
2KX8|1|A|C|3332KX8|1|A|C|334s35
2KX8|1|A|C|3332KX8|1|A|G|294cWW
2KX8|1|A|C|3332KX8|1|A|G|295s55
2KX8|1|A|C|3342KX8|1|A|C|333s53
2KX8|1|A|C|3342KX8|1|A|C|3340BPh
2KX8|1|A|C|3342KX8|1|A|G|293cWW
2KX8|1|A|C|3342KX8|1|A|G|294s55
2KX8|1|A|G|2932KX8|1|A|C|334cWW
2KX8|1|A|G|2932KX8|1|A|G|293n0BP
2KX8|1|A|G|2932KX8|1|A|G|294s35
2KX8|1|A|G|2942KX8|1|A|C|333cWW
2KX8|1|A|G|2942KX8|1|A|C|334s55
2KX8|1|A|G|2942KX8|1|A|G|293s53
2KX8|1|A|G|2942KX8|1|A|G|2940BPh
2KX8|1|A|G|2942KX8|1|A|G|295s35
2KX8|1|A|G|2952KX8|1|A|A|296s35
2KX8|1|A|G|2952KX8|1|A|C|332cWW
2KX8|1|A|G|2952KX8|1|A|C|333s55
2KX8|1|A|G|2952KX8|1|A|G|294s53
2KX8|1|A|G|2952KX8|1|A|G|2950BPh
2KX8|1|A|G|3002KX8|1|A|A|301s35
2KX8|1|A|G|3002KX8|1|A|G|3000BPh
2KX8|1|A|G|3002KX8|1|A|U|299ns53
2KX8|1|A|G|3002KX8|1|A|U|326cWW
2KX8|1|A|G|3002KX8|1|A|U|327s55
2KX8|1|A|G|3022KX8|1|A|A|301s53
2KX8|1|A|G|3022KX8|1|A|C|320ntHW
2KX8|1|A|G|3022KX8|1|A|C|324cWW
2KX8|1|A|G|3022KX8|1|A|G|3020BPh
2KX8|1|A|G|3022KX8|1|A|G|303s35
2KX8|1|A|G|3022KX8|1|A|U|325s55
2KX8|1|A|G|3032KX8|1|A|C|304s35
2KX8|1|A|G|3032KX8|1|A|C|320ntHW
2KX8|1|A|G|3032KX8|1|A|C|323cWW
2KX8|1|A|G|3032KX8|1|A|C|324s55
2KX8|1|A|G|3032KX8|1|A|G|302s53
2KX8|1|A|G|3032KX8|1|A|G|3030BPh
2KX8|1|A|G|3052KX8|1|A|C|304ns53
2KX8|1|A|G|3052KX8|1|A|C|306s35
2KX8|1|A|G|3052KX8|1|A|G|3050BPh
2KX8|1|A|G|3052KX8|1|A|G|322s55
2KX8|1|A|G|3052KX8|1|A|U|319cWW
2KX8|1|A|G|3082KX8|1|A|A|317s55
2KX8|1|A|G|3082KX8|1|A|C|309s35
2KX8|1|A|G|3082KX8|1|A|C|316cWW
2KX8|1|A|G|3082KX8|1|A|G|3080BPh
2KX8|1|A|G|3082KX8|1|A|U|307s53
2KX8|1|A|G|3122KX8|1|A|G|312n1BP
2KX8|1|A|G|3142KX8|1|A|G|314n1BP
2KX8|1|A|G|3152KX8|1|A|A|310s55
2KX8|1|A|G|3152KX8|1|A|C|309cWW
2KX8|1|A|G|3152KX8|1|A|C|316s35
2KX8|1|A|G|3152KX8|1|A|G|3150BPh
2KX8|1|A|G|3182KX8|1|A|A|317s53
2KX8|1|A|G|3182KX8|1|A|C|306cWW
2KX8|1|A|G|3182KX8|1|A|G|3180BPh
2KX8|1|A|G|3182KX8|1|A|U|307s55
2KX8|1|A|G|3182KX8|1|A|U|319s35
2KX8|1|A|G|3222KX8|1|A|C|304cWW
2KX8|1|A|G|3222KX8|1|A|C|323s35
2KX8|1|A|G|3222KX8|1|A|G|305s55
2KX8|1|A|G|3222KX8|1|A|G|3220BPh
2KX8|1|A|U|2992KX8|1|A|A|298s53
2KX8|1|A|U|2992KX8|1|A|C|328cWW
2KX8|1|A|U|2992KX8|1|A|G|300ns35
2KX8|1|A|U|2992KX8|1|A|U|2990BPh
2KX8|1|A|U|2992KX8|1|A|U|327ntWH
2KX8|1|A|U|3072KX8|1|A|A|317cWW
2KX8|1|A|U|3072KX8|1|A|C|306s53
2KX8|1|A|U|3072KX8|1|A|G|308s35
2KX8|1|A|U|3072KX8|1|A|G|318s55
2KX8|1|A|U|3072KX8|1|A|U|3070BPh
2KX8|1|A|U|3112KX8|1|A|A|310s53
2KX8|1|A|U|3112KX8|1|A|U|3110BPh
2KX8|1|A|U|3132KX8|1|A|U|3130BPh
2KX8|1|A|U|3192KX8|1|A|G|305cWW
2KX8|1|A|U|3192KX8|1|A|G|318s53
2KX8|1|A|U|3192KX8|1|A|U|3190BPh
2KX8|1|A|U|3252KX8|1|A|A|301cWW
2KX8|1|A|U|3252KX8|1|A|C|324s53
2KX8|1|A|U|3252KX8|1|A|G|302s55
2KX8|1|A|U|3252KX8|1|A|U|3250BPh
2KX8|1|A|U|3252KX8|1|A|U|326s35
2KX8|1|A|U|3262KX8|1|A|G|300cWW
2KX8|1|A|U|3262KX8|1|A|U|325s53
2KX8|1|A|U|3262KX8|1|A|U|3260BPh
2KX8|1|A|U|3262KX8|1|A|U|327s35
2KX8|1|A|U|3272KX8|1|A|C|328s35
2KX8|1|A|U|3272KX8|1|A|G|300s55
2KX8|1|A|U|3272KX8|1|A|U|299ntHW
2KX8|1|A|U|3272KX8|1|A|U|326s53
2KX8|1|A|U|3272KX8|1|A|U|327n0BP
2KX8|1|A|U|3292KX8|1|A|A|298cWW
2KX8|1|A|U|3292KX8|1|A|C|328s53
2KX8|1|A|U|3292KX8|1|A|U|3290BPh
2KX8|1|A|U|3292KX8|1|A|U|330s35
2KX8|1|A|U|3302KX8|1|A|A|297cWW
2KX8|1|A|U|3302KX8|1|A|A|298s55
2KX8|1|A|U|3302KX8|1|A|U|329s53
2KX8|1|A|U|3302KX8|1|A|U|3300BPh
2KX8|1|A|U|3302KX8|1|A|U|331s35
2KX8|1|A|U|3312KX8|1|A|A|296cWW
2KX8|1|A|U|3312KX8|1|A|A|297s55
2KX8|1|A|U|3312KX8|1|A|C|332s35
2KX8|1|A|U|3312KX8|1|A|U|330s53
2KX8|1|A|U|3312KX8|1|A|U|3310BPh


Base-PairsCount (17)Relative Frequency
cWW171.000
Base-PhosphateCount (36)Relative Frequency
0BPh361.000
Base-StackingCount (24)Relative Frequency
s53120.500
s55120.500

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)

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