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As of 18-May-2022 number of released structures: 12082
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NDB ID: 2LA5  PDB ID: 2LA5 


RNA Base-Pairs, Stacking and other pairwise interactions

CSV Format

Nucleotide 1Nucleotide 2Base-PairsBase-StackingBase-Phosphate
2LA5|1|A|A|142LA5|1|A|A|14n0BP
2LA5|1|A|A|142LA5|1|A|G|11s35
2LA5|1|A|A|142LA5|1|A|G|15s35
2LA5|1|A|A|172LA5|1|A|G|18s55
2LA5|1|A|A|172LA5|1|A|G|6s55n7BP
2LA5|1|A|A|332LA5|1|A|A|330BPh
2LA5|1|A|A|332LA5|1|A|C|32s53
2LA5|1|A|A|332LA5|1|A|G|34s35
2LA5|1|A|A|332LA5|1|A|G|4s55
2LA5|1|A|A|332LA5|1|A|U|3cWW
2LA5|1|A|C|22LA5|1|A|C|20BPh
2LA5|1|A|C|22LA5|1|A|G|1s53n9BP
2LA5|1|A|C|22LA5|1|A|G|34cWW
2LA5|1|A|C|22LA5|1|A|U|3s35
2LA5|1|A|C|222LA5|1|A|U|27s55
2LA5|1|A|C|302LA5|1|A|C|300BPh
2LA5|1|A|C|302LA5|1|A|G|29s538BPh
2LA5|1|A|C|302LA5|1|A|G|31s35
2LA5|1|A|C|302LA5|1|A|G|7cWW
2LA5|1|A|C|322LA5|1|A|A|33s35
2LA5|1|A|C|322LA5|1|A|C|320BPh
2LA5|1|A|C|322LA5|1|A|G|31s53
2LA5|1|A|C|322LA5|1|A|G|4cWW
2LA5|1|A|C|352LA5|1|A|C|350BPh
2LA5|1|A|C|352LA5|1|A|G|1cWW
2LA5|1|A|C|352LA5|1|A|G|34s53
2LA5|1|A|C|352LA5|1|A|G|36s35
2LA5|1|A|C|52LA5|1|A|C|50BPh
2LA5|1|A|C|52LA5|1|A|G|31cWW
2LA5|1|A|C|52LA5|1|A|G|4s53
2LA5|1|A|C|52LA5|1|A|G|7s35
2LA5|1|A|G|12LA5|1|A|C|2s35
2LA5|1|A|G|12LA5|1|A|C|35cWW
2LA5|1|A|G|12LA5|1|A|G|1n0BP
2LA5|1|A|G|12LA5|1|A|G|36s55
2LA5|1|A|G|112LA5|1|A|A|14s53
2LA5|1|A|G|112LA5|1|A|G|12s35
2LA5|1|A|G|112LA5|1|A|G|15cWH
2LA5|1|A|G|112LA5|1|A|G|24cHW
2LA5|1|A|G|112LA5|1|A|G|25s35
2LA5|1|A|G|122LA5|1|A|G|11s53
2LA5|1|A|G|122LA5|1|A|G|120BPh
2LA5|1|A|G|122LA5|1|A|G|15s53n1BP
2LA5|1|A|G|122LA5|1|A|G|16cWH
2LA5|1|A|G|122LA5|1|A|G|25cHW
2LA5|1|A|G|122LA5|1|A|G|6s33
2LA5|1|A|G|152LA5|1|A|A|14s53
2LA5|1|A|G|152LA5|1|A|G|11cHW
2LA5|1|A|G|152LA5|1|A|G|12s35
2LA5|1|A|G|152LA5|1|A|G|15n0BP
2LA5|1|A|G|152LA5|1|A|G|16s35
2LA5|1|A|G|152LA5|1|A|G|20cWH
2LA5|1|A|G|162LA5|1|A|G|12cHW
2LA5|1|A|G|162LA5|1|A|G|15s53
2LA5|1|A|G|162LA5|1|A|G|18s33
2LA5|1|A|G|162LA5|1|A|G|20s53
2LA5|1|A|G|162LA5|1|A|G|21cWH
2LA5|1|A|G|182LA5|1|A|A|17s55
2LA5|1|A|G|182LA5|1|A|G|16s33
2LA5|1|A|G|182LA5|1|A|G|21s33
2LA5|1|A|G|182LA5|1|A|G|26cHW
2LA5|1|A|G|182LA5|1|A|G|6cWH
2LA5|1|A|G|182LA5|1|A|U|28s55
2LA5|1|A|G|202LA5|1|A|G|15cHW
2LA5|1|A|G|202LA5|1|A|G|16s35
2LA5|1|A|G|202LA5|1|A|G|20n0BP
2LA5|1|A|G|202LA5|1|A|G|21s35
2LA5|1|A|G|202LA5|1|A|G|24cWH
2LA5|1|A|G|212LA5|1|A|G|16cHW
2LA5|1|A|G|212LA5|1|A|G|18s33
2LA5|1|A|G|212LA5|1|A|G|20s53
2LA5|1|A|G|212LA5|1|A|G|24s53
2LA5|1|A|G|212LA5|1|A|G|25cWH
2LA5|1|A|G|212LA5|1|A|G|26s33
2LA5|1|A|G|242LA5|1|A|G|11cWH
2LA5|1|A|G|242LA5|1|A|G|20cHW
2LA5|1|A|G|242LA5|1|A|G|21s35
2LA5|1|A|G|242LA5|1|A|G|24n0BP
2LA5|1|A|G|242LA5|1|A|G|25s35
2LA5|1|A|G|252LA5|1|A|G|11s53
2LA5|1|A|G|252LA5|1|A|G|12cWH
2LA5|1|A|G|252LA5|1|A|G|21cHW
2LA5|1|A|G|252LA5|1|A|G|24s53
2LA5|1|A|G|252LA5|1|A|G|9s33
2LA5|1|A|G|262LA5|1|A|G|18cWH
2LA5|1|A|G|262LA5|1|A|G|21s33
2LA5|1|A|G|262LA5|1|A|G|260BPh
2LA5|1|A|G|262LA5|1|A|G|29ns55
2LA5|1|A|G|262LA5|1|A|G|9cHW
2LA5|1|A|G|292LA5|1|A|C|30s35
2LA5|1|A|G|292LA5|1|A|G|26ns55
2LA5|1|A|G|292LA5|1|A|G|290BPh
2LA5|1|A|G|292LA5|1|A|G|9s55
2LA5|1|A|G|292LA5|1|A|U|8cWW
2LA5|1|A|G|312LA5|1|A|C|30s53
2LA5|1|A|G|312LA5|1|A|C|32s35
2LA5|1|A|G|312LA5|1|A|C|5cWW
2LA5|1|A|G|312LA5|1|A|G|310BPh
2LA5|1|A|G|312LA5|1|A|G|7s55
2LA5|1|A|G|342LA5|1|A|A|33s53
2LA5|1|A|G|342LA5|1|A|C|2cWW
2LA5|1|A|G|342LA5|1|A|C|35s35
2LA5|1|A|G|342LA5|1|A|G|340BPh
2LA5|1|A|G|342LA5|1|A|U|3s55
2LA5|1|A|G|362LA5|1|A|C|35s53
2LA5|1|A|G|362LA5|1|A|G|1s55n3BP
2LA5|1|A|G|362LA5|1|A|G|360BPh
2LA5|1|A|G|42LA5|1|A|A|33s55
2LA5|1|A|G|42LA5|1|A|C|32cWW
2LA5|1|A|G|42LA5|1|A|C|5s35
2LA5|1|A|G|42LA5|1|A|G|40BPh
2LA5|1|A|G|42LA5|1|A|U|3s53
2LA5|1|A|G|62LA5|1|A|A|17s55
2LA5|1|A|G|62LA5|1|A|G|12s33
2LA5|1|A|G|62LA5|1|A|G|18cHW
2LA5|1|A|G|62LA5|1|A|G|9cWH
2LA5|1|A|G|62LA5|1|A|U|8s53
2LA5|1|A|G|72LA5|1|A|C|30cWW
2LA5|1|A|G|72LA5|1|A|C|5s53
2LA5|1|A|G|72LA5|1|A|G|31s55
2LA5|1|A|G|72LA5|1|A|G|60BPh
2LA5|1|A|G|72LA5|1|A|U|8s35
2LA5|1|A|G|92LA5|1|A|G|25s33
2LA5|1|A|G|92LA5|1|A|G|26cWH
2LA5|1|A|G|92LA5|1|A|G|29s55
2LA5|1|A|G|92LA5|1|A|G|6cHW
2LA5|1|A|G|92LA5|1|A|G|9n0BP
2LA5|1|A|G|92LA5|1|A|U|8ns53
2LA5|1|A|U|102LA5|1|A|U|10n0BP
2LA5|1|A|U|192LA5|1|A|U|190BPh
2LA5|1|A|U|232LA5|1|A|U|23n0BP
2LA5|1|A|U|272LA5|1|A|C|22s55
2LA5|1|A|U|282LA5|1|A|G|18s55
2LA5|1|A|U|32LA5|1|A|A|33cWW
2LA5|1|A|U|32LA5|1|A|C|2s53
2LA5|1|A|U|32LA5|1|A|G|34s55
2LA5|1|A|U|32LA5|1|A|G|4s35
2LA5|1|A|U|32LA5|1|A|U|30BPh
2LA5|1|A|U|82LA5|1|A|G|29cWW
2LA5|1|A|U|82LA5|1|A|G|6s35
2LA5|1|A|U|82LA5|1|A|G|7s53
2LA5|1|A|U|82LA5|1|A|G|9ns35
2LA5|1|A|U|82LA5|1|A|U|80BPh


Base-PairsCount (19)Relative Frequency
cWW70.368
cWH120.632
Base-PhosphateCount (18)Relative Frequency
8BPh10.056
0BPh170.944
Base-StackingCount (25)Relative Frequency
s3350.200
s53110.440
s5590.360

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)