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NDB ID: 2LAR  PDB ID: 2LAR 


RNA Base-Pairs, Stacking and other pairwise interactions

CSV Format

Nucleotide 1Nucleotide 2Base-PairsBase-StackingBase-Phosphate
2LAR|1|B|A|112LAR|1|B|A|110BPh
2LAR|1|B|A|112LAR|1|B|G|10s53
2LAR|1|B|A|112LAR|1|B|G|12s35
2LAR|1|B|A|142LAR|1|B|A|140BPh
2LAR|1|B|A|142LAR|1|B|C|13s53
2LAR|1|B|A|142LAR|1|B|C|15s35
2LAR|1|B|A|172LAR|1|B|A|170BPh
2LAR|1|B|A|172LAR|1|B|C|16s53
2LAR|1|B|A|172LAR|1|B|U|18s35
2LAR|1|B|C|132LAR|1|B|A|14s35
2LAR|1|B|C|132LAR|1|B|C|130BPh
2LAR|1|B|C|132LAR|1|B|G|12s53
2LAR|1|B|C|152LAR|1|B|A|14s53
2LAR|1|B|C|152LAR|1|B|C|150BPh
2LAR|1|B|C|152LAR|1|B|C|16s35
2LAR|1|B|C|162LAR|1|B|A|17s35
2LAR|1|B|C|162LAR|1|B|C|15s53
2LAR|1|B|C|162LAR|1|B|C|160BPh
2LAR|1|B|G|102LAR|1|B|A|11s35
2LAR|1|B|G|102LAR|1|B|G|100BPh
2LAR|1|B|G|122LAR|1|B|A|11s53
2LAR|1|B|G|122LAR|1|B|C|13s35
2LAR|1|B|G|122LAR|1|B|G|120BPh
2LAR|1|B|U|182LAR|1|B|A|17s53
2LAR|1|B|U|182LAR|1|B|U|180BPh


Base-PairsCount (0)Relative Frequency
Base-PhosphateCount (9)Relative Frequency
0BPh91.000
Base-StackingCount (4)Relative Frequency
s5341.000

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)