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NDB ID: 2LBR  PDB ID: 2LBR 


RNA Base-Pairs, Stacking and other pairwise interactions

CSV Format

Nucleotide 1Nucleotide 2Base-PairsBase-StackingBase-Phosphate
2LBR|1|A|A|102LBR|1|A|G|8n7BP
2LBR|1|A|A|122LBR|1|A|A|120BPh
2LBR|1|A|A|122LBR|1|A|A|5ncWW
2LBR|1|A|A|122LBR|1|A|C|6ncWW
2LBR|1|A|A|52LBR|1|A|A|12ncWW
2LBR|1|A|A|52LBR|1|A|A|50BPh
2LBR|1|A|A|52LBR|1|A|C|6s35
2LBR|1|A|A|52LBR|1|A|G|4s53
2LBR|1|A|C|142LBR|1|A|C|140BPh
2LBR|1|A|C|142LBR|1|A|C|15s35
2LBR|1|A|C|142LBR|1|A|G|4cWW
2LBR|1|A|C|152LBR|1|A|C|14s53
2LBR|1|A|C|152LBR|1|A|C|150BPh
2LBR|1|A|C|152LBR|1|A|C|16s35
2LBR|1|A|C|152LBR|1|A|G|3cWW
2LBR|1|A|C|162LBR|1|A|C|15s53
2LBR|1|A|C|162LBR|1|A|C|160BPh
2LBR|1|A|C|162LBR|1|A|C|17s35
2LBR|1|A|C|162LBR|1|A|G|2cWW
2LBR|1|A|C|172LBR|1|A|C|16s53n9BP
2LBR|1|A|C|172LBR|1|A|C|170BPh
2LBR|1|A|C|172LBR|1|A|G|1cWW
2LBR|1|A|C|172LBR|1|A|G|2ns55
2LBR|1|A|C|62LBR|1|A|A|12ncWW
2LBR|1|A|C|62LBR|1|A|A|5s53
2LBR|1|A|C|62LBR|1|A|C|60BPh
2LBR|1|A|C|62LBR|1|A|U|7s35
2LBR|1|A|G|12LBR|1|A|C|17cWW
2LBR|1|A|G|12LBR|1|A|G|2s35
2LBR|1|A|G|22LBR|1|A|C|16cWW
2LBR|1|A|G|22LBR|1|A|C|17ns55
2LBR|1|A|G|22LBR|1|A|G|1s53
2LBR|1|A|G|22LBR|1|A|G|20BPh
2LBR|1|A|G|22LBR|1|A|G|3s35
2LBR|1|A|G|32LBR|1|A|C|15cWW
2LBR|1|A|G|32LBR|1|A|G|2s53
2LBR|1|A|G|32LBR|1|A|G|30BPh
2LBR|1|A|G|32LBR|1|A|G|4s35
2LBR|1|A|G|42LBR|1|A|A|5s35
2LBR|1|A|G|42LBR|1|A|C|14cWW
2LBR|1|A|G|42LBR|1|A|G|3s53
2LBR|1|A|G|42LBR|1|A|G|40BPh
2LBR|1|A|G|82LBR|1|A|G|8n0BP
2LBR|1|A|G|82LBR|1|A|U|7s53
2LBR|1|A|U|72LBR|1|A|C|6s53
2LBR|1|A|U|72LBR|1|A|G|8s35
2LBR|1|A|U|72LBR|1|A|U|70BPh
2LBR|1|A|U|92LBR|1|A|U|90BPh


Base-PairsCount (4)Relative Frequency
cWW41.000
Base-PhosphateCount (12)Relative Frequency
0BPh121.000
Base-StackingCount (2)Relative Frequency
s5321.000

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)