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NDB ID: 2RLU  PDB ID: 2RLU 


RNA Base-Pairs, Stacking and other pairwise interactions

CSV Format

Nucleotide 1Nucleotide 2Base-PairsBase-StackingBase-Phosphate
2RLU|1|A|A|162RLU|1|A|A|160BPh
2RLU|1|A|A|162RLU|1|A|A|17s35
2RLU|1|A|A|162RLU|1|A|C|15s53
2RLU|1|A|A|162RLU|1|A|G|5s55
2RLU|1|A|A|162RLU|1|A|U|4cWW
2RLU|1|A|A|172RLU|1|A|A|16s53
2RLU|1|A|A|172RLU|1|A|A|170BPh
2RLU|1|A|A|172RLU|1|A|C|18s35
2RLU|1|A|A|172RLU|1|A|U|3cWW
2RLU|1|A|A|172RLU|1|A|U|4s55
2RLU|1|A|C|112RLU|1|A|C|110BPh
2RLU|1|A|C|112RLU|1|A|G|9ns53
2RLU|1|A|C|132RLU|1|A|C|130BPh
2RLU|1|A|C|132RLU|1|A|G|14s35
2RLU|1|A|C|132RLU|1|A|G|7cWW
2RLU|1|A|C|152RLU|1|A|A|16s35
2RLU|1|A|C|152RLU|1|A|C|150BPh
2RLU|1|A|C|152RLU|1|A|G|14s53
2RLU|1|A|C|152RLU|1|A|G|5cWW
2RLU|1|A|C|182RLU|1|A|A|17s53
2RLU|1|A|C|182RLU|1|A|C|180BPh
2RLU|1|A|C|182RLU|1|A|C|19s35
2RLU|1|A|C|182RLU|1|A|G|2cWW
2RLU|1|A|C|192RLU|1|A|C|18s53
2RLU|1|A|C|192RLU|1|A|C|190BPh
2RLU|1|A|C|192RLU|1|A|G|1cWW
2RLU|1|A|C|192RLU|1|A|G|2s55
2RLU|1|A|C|62RLU|1|A|C|60BPh
2RLU|1|A|C|62RLU|1|A|G|14cWW
2RLU|1|A|C|62RLU|1|A|G|5s53
2RLU|1|A|C|62RLU|1|A|G|7s35
2RLU|1|A|G|12RLU|1|A|C|19cWW
2RLU|1|A|G|12RLU|1|A|G|2s35
2RLU|1|A|G|142RLU|1|A|C|13s53
2RLU|1|A|G|142RLU|1|A|C|15s35
2RLU|1|A|G|142RLU|1|A|C|6cWW
2RLU|1|A|G|142RLU|1|A|G|140BPh
2RLU|1|A|G|142RLU|1|A|G|7s55
2RLU|1|A|G|22RLU|1|A|C|18cWW
2RLU|1|A|G|22RLU|1|A|C|19s55
2RLU|1|A|G|22RLU|1|A|G|1s53
2RLU|1|A|G|22RLU|1|A|G|20BPh
2RLU|1|A|G|22RLU|1|A|U|3s35
2RLU|1|A|G|52RLU|1|A|A|16s55
2RLU|1|A|G|52RLU|1|A|C|15cWW
2RLU|1|A|G|52RLU|1|A|C|6s35
2RLU|1|A|G|52RLU|1|A|G|50BPh
2RLU|1|A|G|52RLU|1|A|U|4s53
2RLU|1|A|G|72RLU|1|A|C|13cWW
2RLU|1|A|G|72RLU|1|A|C|6s53
2RLU|1|A|G|72RLU|1|A|G|14s55
2RLU|1|A|G|72RLU|1|A|G|7n0BP
2RLU|1|A|G|82RLU|1|A|G|80BPh
2RLU|1|A|G|82RLU|1|A|G|9s33
2RLU|1|A|G|92RLU|1|A|C|11ns350BPh
2RLU|1|A|G|92RLU|1|A|G|8s33
2RLU|1|A|G|92RLU|1|A|G|91BPh
2RLU|1|A|U|102RLU|1|A|U|100BPh
2RLU|1|A|U|32RLU|1|A|A|17cWW
2RLU|1|A|U|32RLU|1|A|G|2s53
2RLU|1|A|U|32RLU|1|A|U|30BPh
2RLU|1|A|U|32RLU|1|A|U|4s35
2RLU|1|A|U|42RLU|1|A|A|16cWW
2RLU|1|A|U|42RLU|1|A|A|17s55
2RLU|1|A|U|42RLU|1|A|G|5s35
2RLU|1|A|U|42RLU|1|A|U|3s53
2RLU|1|A|U|42RLU|1|A|U|40BPh


Base-PairsCount (7)Relative Frequency
cWW71.000
Base-PhosphateCount (17)Relative Frequency
1BPh10.059
0BPh160.941
Base-StackingCount (9)Relative Frequency
s3310.111
s5340.444
s5540.444

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)