NDB ID: 2RLU PDB ID: 2RLU 
RNA Base-Pairs, Stacking and other pairwise interactions
CSV FormatNucleotide 1 | Nucleotide 2 | Base-Pairs | Base-Stacking | Base-Phosphate |
---|
2RLU|1|A|A|16 | 2RLU|1|A|A|16 | | | 0BPh |
2RLU|1|A|A|16 | 2RLU|1|A|A|17 | | s35 | |
2RLU|1|A|A|16 | 2RLU|1|A|C|15 | | s53 | |
2RLU|1|A|A|16 | 2RLU|1|A|G|5 | | s55 | |
2RLU|1|A|A|16 | 2RLU|1|A|U|4 | cWW | | |
2RLU|1|A|A|17 | 2RLU|1|A|A|16 | | s53 | |
2RLU|1|A|A|17 | 2RLU|1|A|A|17 | | | 0BPh |
2RLU|1|A|A|17 | 2RLU|1|A|C|18 | | s35 | |
2RLU|1|A|A|17 | 2RLU|1|A|U|3 | cWW | | |
2RLU|1|A|A|17 | 2RLU|1|A|U|4 | | s55 | |
2RLU|1|A|C|11 | 2RLU|1|A|C|11 | | | 0BPh |
2RLU|1|A|C|11 | 2RLU|1|A|G|9 | | ns53 | |
2RLU|1|A|C|13 | 2RLU|1|A|C|13 | | | 0BPh |
2RLU|1|A|C|13 | 2RLU|1|A|G|14 | | s35 | |
2RLU|1|A|C|13 | 2RLU|1|A|G|7 | cWW | | |
2RLU|1|A|C|15 | 2RLU|1|A|A|16 | | s35 | |
2RLU|1|A|C|15 | 2RLU|1|A|C|15 | | | 0BPh |
2RLU|1|A|C|15 | 2RLU|1|A|G|14 | | s53 | |
2RLU|1|A|C|15 | 2RLU|1|A|G|5 | cWW | | |
2RLU|1|A|C|18 | 2RLU|1|A|A|17 | | s53 | |
2RLU|1|A|C|18 | 2RLU|1|A|C|18 | | | 0BPh |
2RLU|1|A|C|18 | 2RLU|1|A|C|19 | | s35 | |
2RLU|1|A|C|18 | 2RLU|1|A|G|2 | cWW | | |
2RLU|1|A|C|19 | 2RLU|1|A|C|18 | | s53 | |
2RLU|1|A|C|19 | 2RLU|1|A|C|19 | | | 0BPh |
2RLU|1|A|C|19 | 2RLU|1|A|G|1 | cWW | | |
2RLU|1|A|C|19 | 2RLU|1|A|G|2 | | s55 | |
2RLU|1|A|C|6 | 2RLU|1|A|C|6 | | | 0BPh |
2RLU|1|A|C|6 | 2RLU|1|A|G|14 | cWW | | |
2RLU|1|A|C|6 | 2RLU|1|A|G|5 | | s53 | |
2RLU|1|A|C|6 | 2RLU|1|A|G|7 | | s35 | |
2RLU|1|A|G|1 | 2RLU|1|A|C|19 | cWW | | |
2RLU|1|A|G|1 | 2RLU|1|A|G|2 | | s35 | |
2RLU|1|A|G|14 | 2RLU|1|A|C|13 | | s53 | |
2RLU|1|A|G|14 | 2RLU|1|A|C|15 | | s35 | |
2RLU|1|A|G|14 | 2RLU|1|A|C|6 | cWW | | |
2RLU|1|A|G|14 | 2RLU|1|A|G|14 | | | 0BPh |
2RLU|1|A|G|14 | 2RLU|1|A|G|7 | | s55 | |
2RLU|1|A|G|2 | 2RLU|1|A|C|18 | cWW | | |
2RLU|1|A|G|2 | 2RLU|1|A|C|19 | | s55 | |
2RLU|1|A|G|2 | 2RLU|1|A|G|1 | | s53 | |
2RLU|1|A|G|2 | 2RLU|1|A|G|2 | | | 0BPh |
2RLU|1|A|G|2 | 2RLU|1|A|U|3 | | s35 | |
2RLU|1|A|G|5 | 2RLU|1|A|A|16 | | s55 | |
2RLU|1|A|G|5 | 2RLU|1|A|C|15 | cWW | | |
2RLU|1|A|G|5 | 2RLU|1|A|C|6 | | s35 | |
2RLU|1|A|G|5 | 2RLU|1|A|G|5 | | | 0BPh |
2RLU|1|A|G|5 | 2RLU|1|A|U|4 | | s53 | |
2RLU|1|A|G|7 | 2RLU|1|A|C|13 | cWW | | |
2RLU|1|A|G|7 | 2RLU|1|A|C|6 | | s53 | |
2RLU|1|A|G|7 | 2RLU|1|A|G|14 | | s55 | |
2RLU|1|A|G|7 | 2RLU|1|A|G|7 | | | n0BP |
2RLU|1|A|G|8 | 2RLU|1|A|G|8 | | | 0BPh |
2RLU|1|A|G|8 | 2RLU|1|A|G|9 | | s33 | |
2RLU|1|A|G|9 | 2RLU|1|A|C|11 | | ns35 | 0BPh |
2RLU|1|A|G|9 | 2RLU|1|A|G|8 | | s33 | |
2RLU|1|A|G|9 | 2RLU|1|A|G|9 | | | 1BPh |
2RLU|1|A|U|10 | 2RLU|1|A|U|10 | | | 0BPh |
2RLU|1|A|U|3 | 2RLU|1|A|A|17 | cWW | | |
2RLU|1|A|U|3 | 2RLU|1|A|G|2 | | s53 | |
2RLU|1|A|U|3 | 2RLU|1|A|U|3 | | | 0BPh |
2RLU|1|A|U|3 | 2RLU|1|A|U|4 | | s35 | |
2RLU|1|A|U|4 | 2RLU|1|A|A|16 | cWW | | |
2RLU|1|A|U|4 | 2RLU|1|A|A|17 | | s55 | |
2RLU|1|A|U|4 | 2RLU|1|A|G|5 | | s35 | |
2RLU|1|A|U|4 | 2RLU|1|A|U|3 | | s53 | |
2RLU|1|A|U|4 | 2RLU|1|A|U|4 | | | 0BPh |
Base-Pairs | Count (7) | Relative Frequency |
---|
cWW | 7 | 1.000 |
Base-Phosphate | Count (17) | Relative Frequency |
---|
1BPh | 1 | 0.059 |
0BPh | 16 | 0.941 |
Base-Stacking | Count (9) | Relative Frequency |
---|
s33 | 1 | 0.111 |
s53 | 4 | 0.444 |
s55 | 4 | 0.444 |