A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 14-Aug-2019 number of released structures: 10334
Search for released structures

NDB ID: DDH071  PDB ID: 316D 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
12AA_DA2DA3:DT14DT15_BB0.047-0.1193.566-4.08513.48244.305-1.394-0.4363.37817.3635.26146.382
13AA_DA3DG4:DC13DT14_BB-1.104-0.2273.505-1.473-0.68632.573-0.2751.6893.554-1.2212.62532.613
15AA_DC5DT6:DA11DG12_BB-0.8940.0673.5167.31511.72216.646-4.6625.4062.45133.876-21.14221.602
11AA_DG1DA2:DT15DC16_BB-1.662-0.8163.582-2.426-2.56936.564-0.9032.2673.728-4.0843.85636.729
14AA_DG4DC5:DG12DC13_BB0.2790.3047.3-4.03-0.06711.3811.634-12.7986.79-0.32319.53712.072
16AA_DT6DT7:DA10DA11_BB-0.36-1.2523.764-0.634-0.28431.283-2.260.5293.781-0.5271.17531.291
17AA_DT7DC8:DG9DA10_BB0.92-0.3193.276-2.7991.59332.82-0.83-2.0913.172.8114.93832.974

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.