A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 22-Jun-2022 number of released structures: 12128
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NDB ID: PD1068  PDB ID: 3BRF 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
11BB_DA3DC4:DG14DT15_CC0.164-0.7293.323-0.9456.03433.639-2.191-0.4273.14410.3211.61634.173
19BB_DA11DA12:DT6DT7_CC-0.127-0.0183.1951.5645.64231.982-0.9950.4953.13610.134-2.80932.5
110BB_DA12DA13:DT5DT6_CC-0.006-0.0293.1640.1784.2534.719-0.6670.0353.1387.09-0.29734.971
111BB_DA13DG14:DC4DT5_CC0.38-0.2863.531-0.6532.90338.581-0.815-0.663.4944.3860.98738.691
12BB_DC4DT5:DA13DG14_CC-0.472-0.3513.461-0.7145.25829.532-1.8160.7573.3610.2121.38629.994
14BB_DG6DT7:DA11DC12_CC0.192-0.293.335-1.021.03633.836-0.667-0.4963.3181.781.75233.866
16BB_DG8DG9:DC9DC10_CC-0.006-0.0723.092-1.7182.71230.437-0.643-0.3093.075.1483.26130.602
17BB_DG9DG10:DC8DC9_CC-0.552-0.4693.398-0.3215.12533.638-1.6430.8913.2988.7920.55134.016
18BB_DG10DA11:DT7DC8_CC-0.319-0.1443.242-3.8151.50939.924-0.3810.0333.252.2045.5740.126
112BB_DG14DA15:DT3DC4_CC-0.097-0.0393.079-1.2592.01432.505-0.4-0.0343.0723.5922.24632.589
13BB_DT5DG6:DC12DA13_CC-0.8540.8873.285-0.03310.25834.766-0.0791.3693.40316.7220.05436.203
15BB_DT7DG8:DC10DA11_CC0.3330.5773.2253.4017.03738.0490.004-0.0833.29310.657-5.1538.814

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.