A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 18-Sep-2019 number of released structures: 10387
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NDB ID: PR0329  PDB ID: 3BT7 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
12C_A62:U52_C-0.15-0.2470.6981.671-13.3122.112
14C_A64:U50_C-0.554-0.2490.0840.845-16.6191.468
11C_C61:G53_C-0.257-5.18-0.3476.12.49676.346
13C_C63:G51_C-0.379-0.1550.861-8.697-12.1132.065
16C_C66:G48_C-0.149-0.412-0.11510.026-15.7990.709
15C_G65:C49_C-0.796-0.420.355.496-16.057-0.948
18D_C49:G65_D-0.018-0.4510.081.928-10.459-6.495
17D_G48:C66_D0.258-0.0890.303-3.273-14.1739.359
110D_G51:C63_D-0.068-0.2030.11-2.038-14.326-0.93
112D_G53:C61_D0.072-0.0090.0143.644-6.906-2.545
19D_U50:A64_D0.2730.0270.1181.703-13.3477.662
111D_U52:A62_D0.0450.020.2190.265-16.6886.001

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.