A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 23-Sep-2020 number of released structures: 10967
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NDB ID: PD1277  PDB ID: 3GO8 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
13B_DA5:DT13_C0.304-0.0640.28510.751-12.995-0.53
15B_DA7:DT11_C0.106-0.081-0.072-8.12-16.663.795
111B_DA13:DT5_C0.048-0.3220.0533.387-15.048-1.559
17B_DC9:DG9_C0.277-0.136-0.32513.451-3.864-0.628
18B_DC10:8OG8_C0.275-0.0310.75-31.2754.812-0.113
112B_DC14:DG4_C1.223-0.322-0.0453.29-7.0873.288
11B_DG3:DC15_C-0.234-0.0110.4873.32-12.0547.022
14B_DG6:DC12_C-0.168-0.3110.012-2.251-18.469-0.786
19B_DG11:DC7_C-0.305-0.2190.1455.1167.012-1.116
110B_DG12:DC6_C-0.298-0.2410.3613.461-9.392-1.165
113B_DG15:DC3_C-0.814-0.451-0.02-2.184-6.9621.03
12B_DT4:DA14_C-0.211-0.0930.0385.265-9.6992.758
16B_DT8:DA10_C-0.105-0.0570.001-3.508-7.8574.44

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.