A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 23-Sep-2020 number of released structures: 10967
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NDB ID: PD1277  PDB ID: 3GO8 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
13BB_DA5DG6:DC12DT13_CC-0.013-0.5733.615-1.6185.02933.907-1.834-0.2563.4938.5592.75334.305
15BB_DA7DT8:DA10DT11_CC0.41-0.2383.1630.44-0.48930.608-0.357-0.6933.172-0.925-0.83430.615
111BB_DA13DC14:DG4DT5_CC0.869-0.5263.3171.272.50338.317-1.115-1.163.3043.807-1.93238.416
17BB_DC9DC10:8OG8DG9_CC0.5480.7195.515-5.78950.52821.695-5.054-1.2622.84367.9617.78655.008
18BB_DC10DG11:DC78OG8_CC0.1511.6912.742.9634.06222.1112.9950.5682.99210.419-7.622.669
112BB_DC14DG15:DC3DG4_CC-0.1590.6643.3490.8295.36634.4740.2630.3963.4068.985-1.38834.886
11BB_DG3DT4:DA14DC15_CC0.235-0.273.2752.67-1.60332.157-0.20.0543.292-2.885-4.80532.304
14BB_DG6DA7:DT11DC12_CC-0.036-0.0893.2750.1191.04140.464-0.2450.0663.2721.505-0.17140.477
19BB_DG11DG12:DC6DC7_CC-0.9521.0483.353-4.0756.22235.9440.7550.9163.5629.9516.51736.68
110BB_DG12DA13:DT5DC6_CC-0.075-0.23.5221.3652.18335.621-0.6650.3353.4993.563-2.22735.711
12BB_DT4DA5:DT13DA14_CC-0.6380.2973.179-1.9860.73739.1580.3570.7193.2111.0982.96139.213
16BB_DT8DC9:DG9DA10_CC-0.3210.7463.0164.4059.95826.665-0.6351.593.00520.536-9.08428.765

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.