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As of 22-Jun-2022 number of released structures: 12128
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NDB ID:
PD1281
PDB ID:
3GV7
 
Base Pair Morphology Parameters
CSV Format
Model Number
Pair Number
Pair Name
Shear
Stretch
Stagger
Buckle
Propellor
Opening
1
5
T_DC845:DG869_P
0.327
-0.156
-0.211
-0.032
-7.839
-4.751
1
6
T_DC846:DG868_P
0.251
-0.141
0.08
-3.282
-6.895
-0.704
1
1
T_DG841:DC873_P
-0.346
-0.251
-0.058
4.883
-3.573
3.854
1
2
T_DG842:DC872_P
-0.184
-0.191
0.008
-3.583
-14.185
-1.77
1
3
T_DG843:DC871_P
-0.104
-0.335
-0.044
-10.911
-14.179
1.801
1
4
T_DT844:DA870_P
-0.068
-0.309
0.087
-8.348
-12.61
-0.192
1
7
T_DT847:DA867_P
-0.067
-0.187
0.007
-4.875
-8.703
-1.576
The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures',
Nucleic Acids Res
.
31(17)
, 5108-21. Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures',
Nat Protoc
.
3(7)
, 1213-27.