A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 23-Nov-2022 number of released structures: 12471
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NDB ID: PD1281  PDB ID: 3GV7 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
15TT_DC845DC846:DG868DG869_PP-0.265-0.7063.473-2.5592.17732.062-1.681-0.0053.4293.9284.61832.233
16TT_DC846DT847:DA867DG868_PP-0.558-0.5893.3391.2351.91731.05-1.4671.2783.2743.574-2.30431.131
11TT_DG841DG842:DC872DC873_PP0.535-1.473.61-1.153.73222.583-5.109-1.7793.2969.4382.9122.914
12TT_DG842DG843:DC871DC872_PP0.515-1.5733.4652.02910.20333.216-4.185-0.5542.89617.328-3.44634.763
13TT_DG843DT844:DA870DC871_PP-0.637-1.3273.229-0.6410.83632.89-2.4821.0183.2061.4761.13132.907
14TT_DT844DC845:DG869DA870_PP0.127-0.3783.0765.2295.57135.152-1.3560.4922.9719.091-8.53435.947

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.