A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 1-Dec-2021 number of released structures: 11785
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NDB ID: NA0031  PDB ID: 3HOV 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
110T_BRU23:A6_P0.083-0.12-0.0080.3430.4253.883
13T_DA14:DT3_N-0.007-0.07-0.0170.1370.298-2.837
18T_DC21:G8_P0.11-0.106-0.0470.80.793-0.597
19T_DC22:G7_P0.18-0.056-0.0130.5230.233-0.242
114T_DC27:G2_P0.105-0.079-0.0130.0680.2320.928
11T_DG12:DC5_N-0.103-0.089-0.0080.02-0.194-1.187
14T_DG15:DC2_N-0.063-0.077-0.0060.0350.119-2.183
17T_DG20:C9_P-0.197-0.112-0.0080.0520.2612.058
111T_DG24:C5_P-0.116-0.126-0.022-0.0730.515-1.977
112T_DG25:C4_P-0.121-0.114-0.017-0.0350.0170.3
12T_DT13:DA4_N0.069-0.148-0.02-0.2510.389-1.78
15T_DT16:DA1_N-0.008-0.11-0.0190.5350.208-0.626
16T_DT19:A10_P-0.09-0.149-0.0630.3711.080.891
113T_DT26:A3_P0.029-0.1020.0070.124-0.35-1.077

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.