A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 17-Aug-2022 number of released structures: 12237
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NDB ID: NA0203  PDB ID: 3K59 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
13TT_DA807DC808:DG910DT911_PP-0.689-1.0853.605-0.640.68528.989-2.3331.2213.5931.3681.27829.004
18TT_DA812DG813:DC905DT906_PP-0.493-0.0413.268-3.3268.07930.398-1.5830.2853.18715.0226.18431.6
112TT_DA816DC817:DG901DT902_PP1.064-0.6533.2783.0772.22834.085-1.46-1.3163.3113.786-5.22934.29
14TT_DC808DG809:DC909DG910_PP-0.921-0.0043.251-2.8425.02429.984-1.0141.183.2789.5995.4330.522
16TT_DC810DT811:DA907DG908_PP-0.6040.1623.3472.8674.83228.918-0.7351.8133.2579.562-5.67429.447
111TT_DC815DA816:DT902DG903_PP-0.244-0.0472.9862.5072.53834.027-0.4440.7742.954.323-4.26934.208
11TT_DG805DT806:DA912DOC913_PP-0.852-1.2123.2276.0654.71929.287-3.2132.7772.7739.136-11.74230.257
15TT_DG809DC810:DG908DC909_PP-0.094-0.4393.342-1.9722.90430.231-1.427-0.2213.2865.5443.76630.429
19TT_DG813DG814:DC904DC905_PP-0.257-0.2933.458-1.3698.27332.13-1.970.213.29114.6392.42233.179
110TT_DG814DC815:DG903DC904_PP0.188-0.3723.324-4.0592.61936.153-0.96-0.8683.2514.1976.50636.464
12TT_DT806DA807:DT911DA912_PP0.297-0.5663.44-3.4754.00337.99-1.382-0.9033.3266.1135.30638.345
17TT_DT811DA812:DT906DA907_PP1.4321.3263.5074.9940.0244.7021.732-1.3793.6390.027-6.54244.965

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.