A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 22-Jun-2022 number of released structures: 12128
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NDB ID: NA0207  PDB ID: 3K5N 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
15TT_DA814DG815:DC905DT906_PP1.164-0.0363.7371.312-4.03734.7070.641-1.7113.757-6.736-2.1934.958
19TT_DA818DC819:DG901DT902_PP1.697-0.7672.9465.23714.33956.712-1.456-1.492.82814.8-5.40658.565
12TT_DC810DG811:DC909DG910_PP-1.9630.0012.989-4.3379.79735.879-1.2242.5183.09215.4836.85437.395
14TT_DC812DA814:DT906DG908_PP-3.1240.6695.803-6.017-1.59465.4950.7342.4336.022-1.475.54965.757
18TT_DC817DA818:DT902DG903_PP0.378-1.1113.384.563-4.5419.2841.9145.6763.378-24.545-24.66111.293
13TT_DG811DC812:DG908DC909_PP1.735-0.4593.6211.4186.27338.932-1.499-2.3863.5669.333-2.1139.439
16TT_DG815DG816:DC904DC905_PP-0.539-1.5443.41-0.5448.34929.684-4.5050.9112.88815.9031.03730.815
17TT_DG816DC817:DG903DC904_PP0.828-0.5613.6822.757-6.85542.7480.006-0.8133.767-9.321-3.74943.352
11TT_DT808DC810:DG910DA912_PP0.0911.0126.968-6.125-3.78168.8071.185-0.5556.883-3.3375.40569.136

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.