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As of 28-Sep-2022 number of released structures: 12311
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NDB ID: NA0319  PDB ID: 3KHG 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
16DD_DA807DT808:DA912DT913_EE-0.403-0.1333.172-1.3286.44529.964-1.4820.5083.09112.282.5330.662
111DD_DA812DG813:DC907DT908_EE0.685-0.3493.3463.0796.98128.565-2.199-0.6743.22613.838-6.10329.546
11DD_DG802DT803:DA917DC918_EE-1.0690.3542.412.8652.01133.1030.3742.2132.3293.517-5.0133.282
14DD_DG805DG806:DC914DC915_EE-0.681-0.0933.295-4.92113.26834.098-1.9850.3953.11321.5147.97936.837
15DD_DG806DA807:DT913DC914_EE-0.2790.3222.993-0.0985.60133.013-0.2930.473.0069.7690.17133.472
18DD_DG809DG810:DC910DC911_EE-0.3070.1243.259-7.7892.78837.503-0.162-0.5133.2564.27311.93838.373
19DD_DG810DT811:DA909DC910_EE-0.506-0.6662.902-1.699-1.59227.464-1.0480.6892.961-3.3453.5727.561
12DD_DT803DT804:DA916DA917_EE0.292-1.1473.972-5.326-4.64938.292-1.028-1.2334.004-7.0148.03538.915
13DD_DT804DG805:DC915DA916_EE1.116-0.2423.2317.84317.99330.887-2.921-0.6782.86830.258-13.1936.468
17DD_DT808DG809:DC911DA912_EE0.855-0.3624.1013.1858.54831.204-2.526-0.8283.93315.48-5.76932.479
110DD_DT811DA812:DT908DA909_EE0.752-0.8352.8231.4721.76233.265-1.707-1.0992.8063.072-2.56733.342
116HH_DA1812DG1813:DC1907DT1908_JJ-0.174-0.743.153-2.4424.92329.337-2.408-0.1442.9969.6144.76929.836
112HH_DG1806DT1808:DA1912DC1914_JJ0.1291.9116.350.2858.46773.8161.061-0.0896.5077.027-0.23774.232
114HH_DG1810DT1811:DA1909DC1910_JJ0.199-0.8243.0680.0689.74633.429-2.724-0.3242.72816.511-0.11534.782
113HH_DT1808DG1810:DC1910DA1912_JJ1.199-0.2696.958-5.52417.57263.382-1.765-1.5826.58116.3635.14465.736
115HH_DT1811DA1812:DT1908DA1909_JJ0.313-0.4183.3880.708-0.85334.715-0.565-0.4133.403-1.429-1.18634.733

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.