A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 17-Aug-2022 number of released structures: 12237
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NDB ID: NA0471  PDB ID: 3LZI 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
13T_DA7:DT113_P0.071-0.137-0.226-4.68-7.273.468
14T_DA8:DT112_P0.106-0.283-0.1023.596-5.0812.169
17T_DA11:DT109_P0.332-0.1740.0566.939-10.162-3.16
16T_DC10:DG110_P0.576-0.022-0.1513.393-5.3023.372
110T_DC14:DG106_P0.209-0.13-0.089-0.131-10.8220.709
111T_DC15:DG105_P0.603-0.0670.3032.408-12.1935.158
113T_DC17:DG103_P0.2640.056-0.33410.2365.5634.353
11T_DG5:DOC115_P-0.534-0.032-0.139-9.44-15.6791.677
15T_DG9:DC111_P-0.327-0.2150.2836.956-3.067-1.428
18T_DG12:DC108_P-0.035-0.0670.2766.127-16.5431.686
112T_DG16:DC104_P0.0250.044-0.026-8.253-4.0420.871
12T_DT6:DA114_P-0.193-0.059-0.156-1.1650.188-4.232
19T_DT13:DA107_P-0.065-0.293-0.172.635-8.732-2.228

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.