A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 17-Aug-2022 number of released structures: 12237
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NDB ID: NA0471  PDB ID: 3LZI 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
13TT_DA7DA8:DT112DT113_PP0.37-0.5033.303-1.736-1.8427.045-0.602-1.2293.3-3.9233.70227.161
14TT_DA8DG9:DC111DT112_PP-0.913-0.2843.17-5.7121.03233.546-0.6480.6583.2661.7719.80534.03
17TT_DA11DG12:DC108DT109_PP0.733-0.8583.312-5.6246.50730.81-2.7-2.3172.89911.95810.33631.96
16TT_DC10DA11:DT109DG110_PP-0.901-0.2673.454-4.1274.9636.26-1.1410.8283.4677.8926.56736.81
110TT_DC14DC15:DG105DG106_PP0.751-0.1383.219-2.2910.48333.296-1.771-1.5872.98417.7313.87334.935
111TT_DC15DG16:DC104DG105_PP0.4210.2673.4626.756.15439.607-0.3530.2023.4878.938-9.80440.605
11TT_DG5DT6:DA114DOC115_PP-0.931-1.043.2272.7816.8728.075-3.4922.4322.79513.857-5.6129.018
15TT_DG9DC10:DG110DC111_PP-0.282-0.253.2764.2065.35833.733-1.2521.1273.1449.118-7.15734.394
18TT_DG12DT13:DA107DC108_PP-0.907-0.6763.3063.4583.58334.512-1.6662.0323.126.0-5.79134.859
112TT_DG16DC17:DG103DC104_PP0.787-0.0282.9530.7655.5723.035-1.74-1.6862.88913.686-1.87923.702
12TT_DT6DA7:DT113DA114_PP-0.019-0.4223.415-2.7412.95440.914-0.934-0.2823.3724.2133.9141.103
19TT_DT13DC14:DG106DA107_PP0.5450.0433.2362.2448.77637.747-1.005-0.5483.19313.331-3.40838.78

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.