A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 21-Aug-2019 number of released structures: 10343
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NDB ID: NA0494  PDB ID: 3MDC 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
16TT_DA8DC9:DG3DT4_PP-0.895-0.693.157-0.9813.02331.946-1.7691.4493.1065.4761.77732.099
11TT_DC1DG2:DC3DG4_DD0.470.142.774-0.267-0.10825.8520.338-1.1152.769-0.2410.59825.854
17TT_DC9DT10:DA2DG3_PP-0.458-0.5833.2540.9322.929.506-1.741.0883.1685.675-1.82429.66
12TT_DG2DG3:DC2DC3_DD-0.604-0.2543.5651.611.26139.048-0.5431.1123.5291.885-2.40739.1
13TT_DG3DC4:DG1DC2_DD0.595-1.0193.054-4.9264.94232.374-2.538-1.7912.7558.7378.70933.098
14TT_DG6DT7:DA5DC6_PP0.792-0.7913.4921.6792.15232.94-1.778-1.093.473.787-2.95433.05
15TT_DT7DA8:DT4DA5_PP-0.645-0.4743.578-0.7456.18136.69-1.6350.9033.4679.7331.17437.197
18TT_DT10DG11:DC1DA2_PP0.3770.662.989-5.7958.89233.468-0.147-1.4362.95914.9799.76335.065

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.