A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 22-Jun-2022 number of released structures: 12128
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NDB ID: NA0583  PDB ID: 3NAE 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
13TT_DA7DA8:DT112DT113_PP0.258-0.8263.41.331-2.19424.362-1.231-0.1733.469-5.18-3.14224.494
14TT_DA8DG9:DC111DT112_PP-0.903-0.3183.44-6.907-1.3836.367-0.30.423.556-2.18510.9437.02
17TT_DA11DG12:DC108DT109_PP0.405-0.6913.143-5.9368.18428.767-2.822-1.8632.71415.86511.50830.457
16TT_DC10DA11:DT109DG110_PP-0.705-0.5093.506-4.6368.57333.916-2.2010.4283.34714.3337.7535.249
110TT_DC14DC15:DG105DG106_PP1.1940.0113.0945.91810.27929.542-1.832-1.1143.10119.212-11.0631.785
111TT_DC15DG16:DC104DG105_PP-0.1290.2563.401-0.5226.51635.03-0.5740.1313.39410.7090.85935.616
11TT_DG5DT6:DA114DOC115_PP-0.842-1.0793.1854.3154.71728.699-3.0682.5212.8219.37-8.57129.388
15TT_DG9DC10:DG110DC111_PP-0.616-0.5093.0434.0966.36131.793-1.9031.7382.79311.41-7.34732.659
18TT_DG12DT13:DA107DC108_PP-0.841-0.7733.32.5283.85533.638-1.9341.843.1256.623-4.34333.943
112TT_DG16DC17:DG103DC104_PP0.3240.0563.0173.182-0.74734.7720.197-0.0943.032-1.246-5.31134.92
12TT_DT6DA7:DT113DA114_PP0.198-0.6743.293-5.6543.54339.512-1.387-0.9333.1665.1968.29240.049
19TT_DT13DC14:DG106DA107_PP0.470.1373.2921.6119.28636.957-0.986-0.5123.24814.364-2.49238.099

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.