A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 14-Apr-2021 number of released structures: 11277
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NDB ID: NA0605  PDB ID: 3NGD 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
11C_DA7:DT847_D0.032-0.2940.3285.902-9.6365.234
14C_DA10:DT844_D-0.143-0.2230.26811.294-12.443-0.715
15C_DC11:DG843_D-0.043-0.11-0.10113.558-20.0953.284
16C_DC12:DG842_D0.097-0.1020.2553.43-11.281-0.682
12C_DG8:DC846_D-0.579-0.2310.40311.331-5.792-2.456
13C_DG9:DC845_D0.2120.105-0.028-1.786-7.3882.153
17C_DOC13:DG841_D-0.05-0.401-0.067-5.094-0.086-2.564

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.