A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 22-Jun-2022 number of released structures: 12128
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NDB ID: NA0698  PDB ID: 3OHA 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
13P_DC3:DG14_T0.168-0.0730.319-12.566-11.957-0.16
14P_DC4:DG13_T0.049-0.1290.328-16.042-3.838-2.041
16P_DC6:DG11_T0.125-0.191-0.2021.1-5.603-0.818
17P_DC7:DG10_T0.379-0.117-0.1949.027-6.2343.885
18P_DC8:DG9_T0.108-0.264-0.44310.75-3.142-3.278
19P_DC9:DG8_T0.237-0.441-0.073-4.409-6.156-1.577
11P_DG1:DC16_T-0.144-0.091-0.193-14.032-16.605-0.464
111P_DOC11:DG6_T0.005-0.1710.127-9.954-11.4672.613
12P_DT2:DA15_T-0.279-0.0170.0130.568-11.5963.104
15P_DT5:DA12_T-0.12-0.1030.125-5.359-6.8160.32
110P_DT10:DA7_T0.143-0.2180.136-0.33-16.560.669

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.