A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 28-Sep-2022 number of released structures: 12311
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NDB ID: NA0698  PDB ID: 3OHA 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
13PP_DC3DC4:DG13DG14_TT-0.0820.4983.436-1.439-4.5939.6981.278-0.0523.361-6.7282.1139.977
14PP_DC4DT5:DA12DG13_TT-0.263-0.0313.1060.9780.7428.035-0.2290.7613.0931.526-2.01828.062
16PP_DC6DC7:DG10DG11_TT0.671-0.7283.248-1.1571.44930.615-1.657-1.4943.1842.742.18930.67
17PP_DC7DC8:DG9DG10_TT-0.91-1.1743.260.0696.78827.628-3.8761.8682.89213.948-0.14328.434
18PP_DC8DC9:DG8DG9_TT0.217-1.3313.762-3.5033.02237.957-2.463-0.8313.6164.6255.36238.228
19PP_DC9DT10:DA7DG8_TT-0.148-1.623.217-0.30910.53525.436-5.7070.2452.37122.7220.66627.5
11PP_DG1DT2:DA15DC16_TT-0.494-0.6882.912-0.4361.85630.494-1.6310.8612.8733.5250.82830.552
12PP_DT2DC3:DG14DA15_TT-0.215-0.4033.574-1.989-3.26943.898-0.1990.0813.6-4.3632.65544.056
15PP_DT5DC6:DG11DA12_TT0.8750.0283.1943.8610.5837.021-0.033-0.8623.2660.911-6.0637.219
110PP_DT10DOC11:DG6DA7_TT-0.856-1.3093.4881.7834.2427.428-3.7712.2223.1938.863-3.72627.803

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.