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As of 26-Jan-2023 number of released structures: 12597
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NDB ID:
NA0698
PDB ID:
3OHA
 
Base Pair Morphology Step Parameters
CSV Format
Model Number
Step Number
Step Name
Shift
Slide
Rise
Tilt
Roll
Twist
X-Displacement
Y-Displacement
Helical Rise
Inclination
Tip
Helical Twist
1
3
PP_DC3DC4:DG13DG14_TT
-0.082
0.498
3.436
-1.439
-4.59
39.698
1.278
-0.052
3.361
-6.728
2.11
39.977
1
4
PP_DC4DT5:DA12DG13_TT
-0.263
-0.031
3.106
0.978
0.74
28.035
-0.229
0.761
3.093
1.526
-2.018
28.062
1
6
PP_DC6DC7:DG10DG11_TT
0.671
-0.728
3.248
-1.157
1.449
30.615
-1.657
-1.494
3.184
2.74
2.189
30.67
1
7
PP_DC7DC8:DG9DG10_TT
-0.91
-1.174
3.26
0.069
6.788
27.628
-3.876
1.868
2.892
13.948
-0.143
28.434
1
8
PP_DC8DC9:DG8DG9_TT
0.217
-1.331
3.762
-3.503
3.022
37.957
-2.463
-0.831
3.616
4.625
5.362
38.228
1
9
PP_DC9DT10:DA7DG8_TT
-0.148
-1.62
3.217
-0.309
10.535
25.436
-5.707
0.245
2.371
22.722
0.666
27.5
1
1
PP_DG1DT2:DA15DC16_TT
-0.494
-0.688
2.912
-0.436
1.856
30.494
-1.631
0.861
2.873
3.525
0.828
30.552
1
2
PP_DT2DC3:DG14DA15_TT
-0.215
-0.403
3.574
-1.989
-3.269
43.898
-0.199
0.081
3.6
-4.363
2.655
44.056
1
5
PP_DT5DC6:DG11DA12_TT
0.875
0.028
3.194
3.861
0.58
37.021
-0.033
-0.862
3.266
0.911
-6.06
37.219
1
10
PP_DT10DOC11:DG6DA7_TT
-0.856
-1.309
3.488
1.783
4.24
27.428
-3.771
2.222
3.193
8.863
-3.726
27.803
The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures',
Nucleic Acids Res
.
31(17)
, 5108-21. Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures',
Nat Protoc
.
3(7)
, 1213-27.