A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 22-Jun-2022 number of released structures: 12128
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NDB ID: NA0700  PDB ID: 3OHB 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
11TT_8OG6DA7:DT10DOC11_PP0.918-1.3583.457-1.6274.53829.156-3.645-2.1523.1598.9383.20429.544
12TT_DA7DG8:DC9DT10_PP-0.2-1.5393.042-1.16310.52828.313-4.7750.1832.33920.6322.27930.191
17TT_DA12DG13:DC4DT5_PP0.37-0.013.089-0.9291.64328.281-0.378-0.9573.073.3581.89928.343
110TT_DA15DC16:DG1DT2_PP0.558-0.6272.953-0.5621.82631.427-1.462-1.1222.9033.3671.03631.483
13TT_DG8DG9:DC8DC9_PP0.106-1.5333.8294.7871.65735.691-2.7520.6183.7392.686-7.76236.037
14TT_DG9DG10:DC7DC8_PP0.385-1.2523.3680.7136.1527.365-4.021-0.6273.02812.793-1.48328.044
15TT_DG10DG11:DC6DC7_PP-0.239-0.7173.2390.9073.11331.293-1.8920.6073.1475.752-1.67531.457
16TT_DG11DA12:DT5DC6_PP-0.9270.063.23-4.022-0.81136.2740.2080.9233.308-1.2986.43536.498
18TT_DG13DG14:DC3DC4_PP-0.0660.4733.3991.379-2.57539.5521.0080.2643.359-3.799-2.03539.655
19TT_DG14DA15:DT2DC3_PP0.126-0.3343.6012.329-3.21343.803-0.110.0743.617-4.297-3.11543.974

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.