A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 14-Aug-2019 number of released structures: 10334
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NDB ID: NA0780  PDB ID: 3OY9 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
14CC_DA7DT8:DA12DT13_DD0.44-0.4063.345-0.5964.2130.189-1.623-0.9573.2518.0331.13730.48
18CC_DA11DA12:DT8DT9_DD-0.1690.0233.269-2.675-1.83739.3970.25-0.0653.269-2.7193.9639.525
19CC_DA12DT13:DA7DT8_DD-0.045-0.4653.0710.875-2.59331.605-0.40.2353.096-4.75-1.60231.72
13CC_DC6DA7:DT13DG14_DD-1.4681.0053.382-4.2457.42538.5230.5361.6323.64211.0886.33939.426
113CC_DC16DG17:DC3DG4_DD-0.0240.6453.209-2.84311.51232.081-0.757-0.4183.23319.9974.93834.148
115CC_DC18DA19:DT1DG2_DD0.266-0.1723.465.61211.80532.152-2.2130.4673.20320.299-9.64934.642
11CC_DG4DT5:DA15DC16_DD0.488-0.1552.953-3.8394.95932.779-1.005-1.4182.8268.6886.72533.358
16CC_DG9DG10:DC10DC11_DD-0.8570.5493.213-0.0775.48230.703-0.021.5793.26210.2510.14531.177
17CC_DG10DA11:DT9DC10_DD0.0-0.223.5021.573.12440.775-0.680.1833.4754.473-2.24940.918
114CC_DG17DC18:DG2DC3_DD0.689-0.2713.142-2.2422.89731.442-1.004-1.6573.055.3244.1231.65
12CC_DT5DC6:DG14DA15_DD0.2370.7393.0091.2477.28630.0730.048-0.2153.10513.781-2.35830.948
15CC_DT8DG9:DC11DA12_DD0.5751.8963.042.0395.20838.0652.25-0.6263.2877.932-3.10538.459
110CC_DT13DT14:DA6DA7_DD-0.005-0.1783.2961.172-3.12538.3440.1220.1553.298-4.746-1.7838.483
111CC_DT14DT15:DA5DA6_DD-0.039-0.0913.3010.42-3.50538.1360.3050.1123.296-5.351-0.64138.293
112CC_DT15DC16:DG4DA5_DD-0.021-0.0683.315-1.1131.02837.98-0.236-0.1123.3121.5791.70938.009

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.